RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 RIMS3Q9UJD0 308 aa9.49□□□□□ -0.89
SS18-221ENST00000582448 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
SS18-221ENST00000582448 MRPS33Q9Y291 106 aaKnown RBP9.49□□□□□ -0.89
SS18-221ENST00000582448 ATG4BQ9Y4P1 393 aa9.49□□□□□ -0.89
SS18-221ENST00000582448 LRRC42Q9Y546 428 aa9.49□□□□□ -0.89
SS18-221ENST00000582448 CSAG2Q9Y5P2 127 aa9.49□□□□□ -0.89
SS18-221ENST00000582448 SPTBP11277 2137 aa9.49□□□□□ -0.89
SS18-221ENST00000582448 MDC1Q14676 2089 aaKnown RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 CELSR2Q9HCU4 2923 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 GLOD5A6NK44 160 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 P2RX6O15547 441 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 TPST1O60507 370 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 ALOX12BO75342 701 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 SERPINA1P01009 418 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 SCG5P05408 212 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 HBQ1P09105 142 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 IL1RNP18510 177 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 HOXA5P20719 270 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 PEX2P28328 305 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 PPP2R1BP30154 601 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 FRKP42685 505 aaPredicted RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 AVPR1BP47901 424 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CCT3P49368 545 aaKnown RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 TP53BP2Q13625 1128 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CRB2Q5IJ48 1285 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 WLSQ5T9L3 541 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 GARNL3Q5VVW2 1013 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 LPCAT4Q643R3 524 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 TMEM64Q6YI46 380 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 Q6ZS92 163 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 MMP21Q8N119 569 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 PAPD5Q8NDF8 572 aaKnown RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 OR4K14Q8NGD5 310 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 OR5AK3PQ8NH89 298 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 SFXN5Q8TD22 340 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 GRHL3Q8TE85 626 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 LZICQ8WZA0 190 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 NEURL3Q96EH8 262 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CENPNQ96H22 339 aaPredicted RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 PYURFQ96I23 114 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 IP6K3Q96PC2 410 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 MAPKAP1Q9BPZ7 522 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 C9orf16Q9BUW7 83 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CHID1Q9BWS9 393 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CHRNA10Q9GZZ6 450 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 SPRTNQ9H040 489 aaPredicted RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 TMEM38AQ9H6F2 299 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CXorf36Q9H7Y0 433 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CLK4Q9HAZ1 481 aaKnown RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 CNOT11Q9UKZ1 510 aaKnown RBP9.48□□□□□ -0.89
SS18-221ENST00000582448 USP22Q9UPT9 525 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 NAALAD2Q9Y3Q0 740 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 V9GYQ6 96 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CSMD1Q96PZ7 3565 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CROCCQ5TZA2 2017 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
SS18-221ENST00000582448 MYO1GB0I1T2 1018 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 H0YJX3 145 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 GALR3O60755 368 aaPredicted RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 KLF7O75840 302 aaPredicted RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 PDE9AO76083 593 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 IGHEP01854 428 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 FHP07954 510 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 SMIM10L1P0DMW3 83 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ETFAP13804 333 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ATP6V1C1P21283 382 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 KDELR2P33947 212 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 KHKP50053 298 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 GZMMP51124 257 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ARHGDIAP52565 204 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 LIM2P55344 173 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 GFRA1P56159 465 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 DSTNP60981 165 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 DCDP81605 110 aaKnown RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 SCARB2Q14108 478 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 GRM7Q14831 915 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ATP6AP1Q15904 470 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 MPEG1Q2M385 716 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 DEFB110Q30KQ9 67 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 FAM214AQ32MH5 1076 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 CMPK2Q5EBM0 449 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 SAXO2Q658L1 398 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 IGFL3Q6UXB1 125 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ZNF551Q7Z340 670 aaPredicted RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 C6orf120Q7Z4R8 191 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 PATL1Q86TB9 770 aaKnown RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 RNF130Q86XS8 419 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 PDSS2Q86YH6 399 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ZC3H7AQ8IWR0 971 aaKnown RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 LRRC25Q8N386 305 aaPredicted RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 DNAJC22Q8N4W6 341 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 METTL25Q8N6Q8 603 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 PACRGLQ8N7B6 248 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 AMER3Q8N944 861 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ANKFN1Q8N957 763 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 PSMA8Q8TAA3 256 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 TANKQ92844 425 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 PEX11GQ96HA9 241 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms