RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ACTN3Q08043 901 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 FAM120AOSQ5T036 256 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 FAM159AQ6UWV7 190 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 OLFM4Q6UX06 510 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 SERPINA9Q86WD7 417 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 CCNYQ8ND76 341 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 C7orf33Q8WU49 177 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 TRUB1Q8WWH5 349 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 SLC25A36Q96CQ1 311 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 TMEM101Q96IK0 257 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 CABS1Q96KC9 395 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 TXN2Q99757 166 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 PATZ1Q9HBE1 687 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 NANSQ9NR45 359 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 ANKMY1Q9P2S6 941 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 TRIM10Q9UDY6 481 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 RAB26Q9ULW5 256 aa1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 SAMD4AQ9UPU9 718 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 PRG3Q9Y2Y8 225 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-206ENST00000581631 IGHV1OR15-1A0A075B7D0 117 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 IGHV7-81A0A0B4J1V7 117 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 FAM170AA1A519 330 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 TRAF3IP2O43734 574 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 BBOX1O75936 387 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 PNPP00491 289 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 HOXD10P28358 340 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 NTSP30990 170 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 AKT2P31751 481 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 UGT1A5P35504 534 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 NOVA1P51513 510 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 LINC00315P59091 139 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 TFDP1Q14186 410 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 C2orf76Q3KRA6 126 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 TMEM52BQ4KMG9 183 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 CYB5R2Q6BCY4 276 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 ASPHD2Q6ICH7 369 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 SKA3Q8IX90 412 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 BATF2Q8N1L9 274 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 ARIH2OSQ8N7S6 290 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 SPC24Q8NBT2 197 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 NEK11Q8NG66 645 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 OR2AP1Q8NGE2 309 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 OR52E1Q8NGJ3 308 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 URGCPQ8TCY9 931 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 RDH5Q92781 318 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 ELMO2Q96JJ3 720 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 SLC35E1Q96K37 410 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 TBX15Q96SF7 602 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 TBC1D10AQ9BXI6 508 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 NXF3Q9H4D5 531 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 DNPEPQ9ULA0 475 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 IFT52Q9Y366 437 aa1.96□□□□□ -2.1
SMCHD1-206ENST00000581631 LTBP1Q14766 1721 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 H3BTX0 84 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 ZNF264O43296 627 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 TRIM3O75382 744 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 NDUFA7O95182 113 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 IGHV3-48P01763 117 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 CHRNA1P02708 482 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 CXCL10P02778 98 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 GSTT2P0CG29 244 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 GSTT2BP0CG30 244 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 HTR1EP28566 365 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 PTPN6P29350 595 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 HSPA1LP34931 641 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 RPS10P46783 165 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 GNPDA1P46926 289 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 NUP107P57740 925 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 PVRIGQ6DKI7 326 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 OR8G2PQ6IF36 304 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 ETFRF1Q6IPR1 90 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 WDR88Q6ZMY6 472 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 HSD11B1LQ7Z5J1 315 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 C17orf82Q86X59 251 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 C20orf203Q8NBC4 194 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 NRTNQ99748 197 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 TMEM121Q9BTD3 319 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 NFKBIZQ9BYH8 718 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 NARFLQ9H6Q4 476 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 KAT8Q9H7Z6 458 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 COG4Q9H9E3 785 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 GPN2Q9H9Y4 310 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 TRPV5Q9NQA5 729 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 CYTL1Q9NRR1 136 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 PAK1IP1Q9NWT1 392 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 C1orf123Q9NWV4 160 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 UTP6Q9NYH9 597 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 GALPQ9UBC7 116 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 IL20RAQ9UHF4 553 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 ZNF223Q9UK11 482 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 APPL1Q9UKG1 709 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 UBQLN1Q9UMX0 589 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 STRAPQ9Y3F4 350 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 MAB21L2Q9Y586 359 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 GMPPBQ9Y5P6 360 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 USP16Q9Y5T5 823 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 CACNG2Q9Y698 323 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 PARD3Q8TEW0 1356 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 PLEKHG1Q9ULL1 1385 aa1.95□□□□□ -2.1
SMCHD1-206ENST00000581631 HIVEP2P31629 2446 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms