RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MDH2P40926 338 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 XCR1P46094 333 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 BDKRB1P46663 353 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 RPL8P62917 257 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 RGS1Q08116 209 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 KCNJ11Q14654 390 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 CCDC57Q2TAC2 916 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 QRICH1Q2TAL8 776 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 TEX44Q53QW1 395 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 FAM120AOSQ5T036 256 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 DCST2Q5T1A1 773 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 SLC22A10Q63ZE4 541 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 DPY19L4Q7Z388 723 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 IFNEQ86WN2 208 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 HSCBQ8IWL3 235 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 GPD1LQ8N335 351 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 OR2T33Q8NG76 320 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 FEM1AQ9BSK4 669 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 RIBC2Q9H4K1 309 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 PNO1Q9NRX1 252 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 FARSBQ9NSD9 589 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 CHRNA9Q9UGM1 479 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 CRLS1Q9UJA2 301 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 BLOC1S6Q9UL45 172 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 ATP6V0A2Q9Y487 856 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 FAM220BPB1ANY3 271 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 E9PLD3 99 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 CLDN5O00501 218 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 NDC80O14777 642 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 STX7O15400 261 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 EFNA2O43921 213 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 PCCBP05166 539 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 HBQ1P09105 142 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 ATP5A1P25705 553 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 PSMA2P25787 234 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 NF2P35240 595 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 HSD17B7P56937 341 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 CNTN2Q02246 1040 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 BDH1Q02338 343 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 CD47Q08722 323 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 ELP6Q0PNE2 266 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 ZNF154Q13106 437 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 DPYSL3Q14195 570 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 ATXN7L3Q14CW9 347 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 CELF3Q5SZQ8 465 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 BLOC1S2Q6QNY1 142 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 PAMR1Q6UXH9 720 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 BAIAP2L2Q6UXY1 529 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 Q6ZR54 194 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 ANKRD37Q7Z713 158 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 C9orf40Q8IXQ3 194 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 LINC00612Q8N6U2 182 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 NANPQ8TBE9 248 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 THRSPQ92748 146 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 SIGLEC12Q96PQ1 595 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 GLT8D2Q9H1C3 349 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 IKZF5Q9H5V7 419 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 MRPL39Q9NYK5 338 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 DPM3Q9P2X0 92 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 Q9UF83 564 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 CYTH4Q9UIA0 394 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 ANAPC7Q9UJX3 599 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 SMC3Q9UQE7 1217 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 L3MBTL1Q9Y468 752 aa3.5□□□□□ -1.85
SMCHD1-205ENST00000581383 SF3B1O75533 1304 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 PPIAL4CA0A0B4J2A2 164 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 ESYT2A0FGR8 921 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 OR6C65A6NJZ3 312 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 LATO43561 262 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 NUDT21O43809 227 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 TM7SF2O76062 418 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 UFL1O94874 794 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 MFN2O95140 757 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 IGF1P05019 195 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 PPIAL4GP0DN37 164 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 ATP6V1C1P21283 382 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 DRD5P21918 477 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 LIM2P55344 173 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 VLDLRP98155 873 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 ST3GAL3Q11203 375 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 GLYR1Q49A26 553 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 GPR65Q8IYL9 337 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 OR9A4Q8NGU2 314 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 ZPLD1Q8TCW7 415 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 MRAPQ8TCY5 172 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 ARNTL2Q8WYA1 636 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 RAB7BQ96AH8 199 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 SLC30A2Q9BRI3 323 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 DEFB126Q9BYW3 111 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 XPO7Q9UIA9 1087 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 VSIG4Q9Y279 399 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 GSTK1Q9Y2Q3 226 aa3.49□□□□□ -1.85
SMCHD1-205ENST00000581383 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 FCN1O00602 326 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 CTAGE5O15320 804 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 OR1F1O43749 312 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 SCRG1O75711 98 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 IDH1O75874 414 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms