RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 RPRD1AQ96P16 312 aaPredicted RBP3.59□□□□□ -1.84
NF1-220ENST00000581113 ZNF607Q96SK3 696 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 CHCHD5Q9BSY4 110 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 API5Q9BZZ5 524 aaKnown RBP3.59□□□□□ -1.84
NF1-220ENST00000581113 SLC39A8Q9C0K1 460 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 TDRD3Q9H7E2 651 aaKnown RBP3.59□□□□□ -1.84
NF1-220ENST00000581113 TUBG2Q9NRH3 451 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 PNPLA3Q9NST1 481 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 VPS18Q9P253 973 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 KCNN3Q9UGI6 736 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 ANGPTL2Q9UKU9 493 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 MRPS18CQ9Y3D5 142 aaKnown RBP3.59□□□□□ -1.84
NF1-220ENST00000581113 MFHAS1Q9Y4C4 1052 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 PSME4Q14997 1843 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 ARID2Q68CP9 1835 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 SPEF2Q9C093 1822 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 KIF16BQ96L93 1317 aa3.59□□□□□ -1.84
NF1-220ENST00000581113 SSC5DA1L4H1 1573 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 ZNF646O15015 1829 aaPredicted RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 TRAV6A0A075B6T7 132 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 TRBV2A0A0J9YWF9 115 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 FAM230AA0A1W2PPH8 454 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 CCDC162PA2VCL2 907 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 MEI4A8MW99 385 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 LMO7DNF2Z398 122 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 PRRG1O14668 218 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 CHADO15335 359 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 AKR7A2O43488 359 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 HSF2BPO75031 334 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 GRAP2O75791 330 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 CIAO1O76071 339 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 CSTAP01040 98 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 TROVE2P10155 538 aaKnown RBP eCLIP3.58□□□□□ -1.84
NF1-220ENST00000581113 MAGEA1P43355 309 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 IER3P46695 156 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 SLC11A1P49279 550 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 HNRNPFP52597 415 aaKnown RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 FKBP3Q00688 224 aaKnown RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 TGM3Q08188 693 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 FCHO2Q0JRZ9 810 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 PDZK1IP1Q13113 114 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 UPP1Q16831 310 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 C10orf120Q5SQS8 335 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 OFCC1Q8IZS5 231 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 LYG1Q8N1E2 194 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 ABHD12Q8N2K0 398 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 STEAP2Q8NFT2 490 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 OR52B4Q8NGK2 314 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 SPPL2AQ8TCT8 520 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 RFT1Q96AA3 541 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 ESAMQ96AP7 390 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 ZNF707Q96C28 371 aaPredicted RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 BPIFA2Q96DR5 249 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 C19orf60Q96EN9 201 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 C11orf24Q96F05 449 aaPredicted RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 TPD52L3Q96J77 140 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 NAP1L3Q99457 506 aaPredicted RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 C17orf62Q9BQA9 187 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 RAB11FIP5Q9BXF6 653 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 IDI2Q9BXS1 227 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 DDX47Q9H0S4 455 aaKnown RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 RHBGQ9H310 441 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 TUBB1Q9H4B7 451 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 KCNK13Q9HB14 408 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 IL1RAPQ9NPH3 570 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 AGPAT5Q9NUQ2 364 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 ETNK2Q9NVF9 386 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 PILRAQ9UKJ1 303 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 BARX2Q9UMQ3 279 aaPredicted RBP3.58□□□□□ -1.84
NF1-220ENST00000581113 UBE4BO95155 1302 aa3.58□□□□□ -1.84
NF1-220ENST00000581113 BTBD17A6NE02 478 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 OR2AG2A6NM03 316 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 A8MU76 341 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 LGALS8O00214 317 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 INPP4BO15327 924 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 ZNF749O43361 778 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 TNFSF12O43508 249 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 B4GALT2O60909 372 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 GLCEO94923 617 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 SMC2O95347 1197 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 KRT8P05787 483 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 RALBP11234 206 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 KRT3P12035 628 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 CCDC130P13994 396 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 PRKACBP22694 351 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 PRMT2P55345 433 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 MLF2Q15773 248 aaPredicted RBP3.57□□□□□ -1.84
NF1-220ENST00000581113 FUT11Q495W5 492 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 TCTEX1D4Q5JR98 221 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 PDPK2PQ6A1A2 396 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 APOBEC3HQ6NTF7 200 aaKnown RBP3.57□□□□□ -1.84
NF1-220ENST00000581113 ARSKQ6UWY0 536 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 TMEM26Q6ZUK4 368 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 RFPL4BQ6ZWI9 263 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 LRRC70Q7Z2Q7 622 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 SLC47A2Q86VL8 602 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 P2RY8Q86VZ1 359 aa3.57□□□□□ -1.84
NF1-220ENST00000581113 FAM228AQ86W67 206 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms