RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 NPIPA8P0DM63 369 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 CPA3P15088 417 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 SDC1P18827 310 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 TBXA2RP21731 343 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 PCSK6P29122 969 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 SHC1P29353 583 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 EEFSECP57772 596 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 RPS3AP61247 264 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 EEF1A1P68104 462 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 PSPHP78330 225 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 PRR5P85299 388 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 C17orf67Q0P5P2 114 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 GANABQ14697 944 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 GUSBP1Q15486 140 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 TSC22D1Q15714 1073 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 DUSP5Q16690 384 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.01□□□□□ -1.13
GGA3-207ENST00000578896 TMEM44Q2T9K0 475 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 CTU2Q2VPK5 515 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 RFTN2Q52LD8 501 aaPredicted RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 EEF1A1P5Q5VTE0 462 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 SHEQ5VZ18 495 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 YTHDF3Q7Z739 585 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 LCA5Q86VQ0 697 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 LSRQ86X29 649 aaPredicted RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 C10orf107Q8IVU9 208 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 METTL25Q8N6Q8 603 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 SLC16A11Q8NCK7 471 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 OR10D3Q8NH80 312 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 PPP1R14CQ8TAE6 165 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 POC1BQ8TC44 478 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 EPS8L3Q8TE67 593 aaKnown RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 ROBO4Q8WZ75 1007 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 DTNBP1Q96EV8 351 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 GIMAP5Q96F15 307 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 MARK4Q96L34 752 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 CCL19Q99731 98 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 SLC39A3Q9BRY0 314 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 GATA5Q9BWX5 397 aaPredicted RBP8.01□□□□□ -1.13
GGA3-207ENST00000578896 TUBB1Q9H4B7 451 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 C12orf49Q9H741 205 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 OXSMQ9NWU1 459 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 GIN1Q9NXP7 522 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 ELOVL5Q9NYP7 299 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 ZNF226Q9NYT6 803 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 ZNF175Q9Y473 711 aa8.01□□□□□ -1.13
GGA3-207ENST00000578896 HEATR1Q9H583 2144 aaKnown RBP8□□□□□ -1.13
GGA3-207ENST00000578896 UQCRHLA0A096LP55 91 aa8□□□□□ -1.13
GGA3-207ENST00000578896 A0A0J9YW62 118 aa8□□□□□ -1.13
GGA3-207ENST00000578896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8□□□□□ -1.13
GGA3-207ENST00000578896 A0A1W2PRB8 838 aa8□□□□□ -1.13
GGA3-207ENST00000578896 SLC28A1O00337 649 aa8□□□□□ -1.13
GGA3-207ENST00000578896 COPEO14579 308 aa8□□□□□ -1.13
GGA3-207ENST00000578896 AZIN1O14977 448 aa8□□□□□ -1.13
GGA3-207ENST00000578896 KLF4O43474 513 aa8□□□□□ -1.13
GGA3-207ENST00000578896 NDUFB5O43674 189 aa8□□□□□ -1.13
GGA3-207ENST00000578896 KCNK2O95069 426 aa8□□□□□ -1.13
GGA3-207ENST00000578896 NKX2-2O95096 273 aa8□□□□□ -1.13
GGA3-207ENST00000578896 GOSR1O95249 250 aa8□□□□□ -1.13
GGA3-207ENST00000578896 PLGP00747 810 aaPredicted RBP8□□□□□ -1.13
GGA3-207ENST00000578896 UROSP10746 265 aa8□□□□□ -1.13
GGA3-207ENST00000578896 CD8BP10966 210 aa8□□□□□ -1.13
GGA3-207ENST00000578896 MAP3K8P41279 467 aa8□□□□□ -1.13
GGA3-207ENST00000578896 GSTM5P46439 218 aa8□□□□□ -1.13
GGA3-207ENST00000578896 PSMD4P55036 377 aaKnown RBP8□□□□□ -1.13
GGA3-207ENST00000578896 NR1H2P55055 460 aa8□□□□□ -1.13
GGA3-207ENST00000578896 MANFP55145 182 aaKnown RBP8□□□□□ -1.13
GGA3-207ENST00000578896 DNAJB13P59910 316 aa8□□□□□ -1.13
GGA3-207ENST00000578896 RPL38P63173 70 aaKnown RBP8□□□□□ -1.13
GGA3-207ENST00000578896 SLC18A2Q05940 514 aa8□□□□□ -1.13
GGA3-207ENST00000578896 NDUFAF6Q330K2 333 aa8□□□□□ -1.13
GGA3-207ENST00000578896 GALNTL6Q49A17 601 aa8□□□□□ -1.13
GGA3-207ENST00000578896 MFSD12Q6NUT3 480 aa8□□□□□ -1.13
GGA3-207ENST00000578896 IKBIPQ70UQ0 350 aa8□□□□□ -1.13
GGA3-207ENST00000578896 FAM214BQ7L5A3 538 aa8□□□□□ -1.13
GGA3-207ENST00000578896 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
GGA3-207ENST00000578896 ATP6V1C2Q8NEY4 427 aa8□□□□□ -1.13
GGA3-207ENST00000578896 FAM76AQ8TAV0 307 aa8□□□□□ -1.13
GGA3-207ENST00000578896 AGR3Q8TD06 166 aa8□□□□□ -1.13
GGA3-207ENST00000578896 UBLCP1Q8WVY7 318 aaPredicted RBP8□□□□□ -1.13
GGA3-207ENST00000578896 JADE3Q92613 823 aa8□□□□□ -1.13
GGA3-207ENST00000578896 PPCDCQ96CD2 204 aa8□□□□□ -1.13
GGA3-207ENST00000578896 CCDC126Q96EE4 140 aa8□□□□□ -1.13
GGA3-207ENST00000578896 ARSGQ96EG1 525 aa8□□□□□ -1.13
GGA3-207ENST00000578896 CHMP6Q96FZ7 201 aa8□□□□□ -1.13
GGA3-207ENST00000578896 ADGRG7Q96K78 797 aa8□□□□□ -1.13
GGA3-207ENST00000578896 RNF145Q96MT1 663 aa8□□□□□ -1.13
GGA3-207ENST00000578896 REEP4Q9H6H4 257 aa8□□□□□ -1.13
GGA3-207ENST00000578896 C3orf14Q9HBI5 128 aa8□□□□□ -1.13
GGA3-207ENST00000578896 MED17Q9NVC6 651 aa8□□□□□ -1.13
GGA3-207ENST00000578896 C1orf109Q9NX04 203 aa8□□□□□ -1.13
GGA3-207ENST00000578896 MRTO4Q9UKD2 239 aaKnown RBP8□□□□□ -1.13
GGA3-207ENST00000578896 AP4B1Q9Y6B7 739 aa8□□□□□ -1.13
GGA3-207ENST00000578896 IGLV3-32A0A0A0MS00 114 aa7.99□□□□□ -1.13
GGA3-207ENST00000578896 ALG1L2C9J202 215 aa7.99□□□□□ -1.13
GGA3-207ENST00000578896 NPIPB8E9PQR5 432 aa7.99□□□□□ -1.13
GGA3-207ENST00000578896 ARHGEF9O43307 516 aa7.99□□□□□ -1.13
GGA3-207ENST00000578896 RGS14O43566 566 aa7.99□□□□□ -1.13
GGA3-207ENST00000578896 EFNA2O43921 213 aa7.99□□□□□ -1.13
GGA3-207ENST00000578896 SLITRK5O94991 958 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms