RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 DHFR2Q86XF0 187 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 SLC44A2Q8IWA5 706 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 AQP12AQ8IXF9 295 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 KBTBD2Q8IY47 623 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 C10orf67Q8IYJ2 551 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 TAGAPQ8N103 731 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 EID3Q8N140 333 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 COX18Q8N8Q8 333 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 FAM156AQ8NDB6 213 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 FBLIM1Q8WUP2 373 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 JADE3Q92613 823 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 CDS1Q92903 461 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MAL2Q969L2 176 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MEGF10Q96KG7 1140 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 CCNL2Q96S94 520 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 G6PC3Q9BUM1 346 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ITPAQ9BY32 194 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PRDM14Q9GZV8 571 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ZNF350Q9GZX5 532 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PCDHAC1Q9H158 963 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NXF5Q9H1B4 397 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 SLC38A1Q9H2H9 487 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MRTO4Q9UKD2 239 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 PACSIN3Q9UKS6 424 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 CBLCQ9ULV8 474 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 USP22Q9UPT9 525 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 SF3B6Q9Y3B4 125 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 DSPPQ9NZW4 1301 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 TRBV11-1A0A0K0K1C0 115 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MED19A0JLT2 244 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 GXYLT2A0PJZ3 443 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 C5orf58C9J3I9 102 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 M0QX08 132 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NKX2-8O15522 239 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 KLK10O43240 276 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PRKNO60260 465 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 SERPINB7O75635 380 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 CIB2O75838 187 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PDE9AO76083 593 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 SORBS2O94875 1100 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 IL33O95760 270 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 IFNA14P01570 189 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NGFRP08138 427 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 HOXB6P17509 224 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 WT1P19544 449 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 EIF2S3P41091 472 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 NR0B1P51843 470 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 PNLIPRP2P54317 469 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 RRADP55042 308 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NRG3P56975 720 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ACTR3P61158 418 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 Q0VFX4 171 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 FUT5Q11128 374 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ATP1A4Q13733 1029 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 DECR1Q16698 335 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MTX3Q5HYI7 312 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 DCST2Q5T1A1 773 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MAMDC2Q7Z304 686 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 C16orf62Q7Z3J2 963 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 WDR53Q7Z5U6 358 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 VASH2Q86V25 355 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 SLC5A8Q8N695 610 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 BCORP1Q8N888 145 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ANKFN1Q8N957 763 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 OR4N2Q8NGD1 307 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 BBS10Q8TAM1 723 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PSMF1Q92530 271 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PIK3R3Q92569 461 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 TMEM19Q96HH6 336 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 COX4I2Q96KJ9 171 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ZNF607Q96SK3 696 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 SPATA5L1Q9BVQ7 753 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 HOXD1Q9GZZ0 328 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 DCAF13Q9NV06 445 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 OLAHQ9NV23 265 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 YARS2Q9Y2Z4 477 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 OR10H1Q9Y4A9 318 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 OR6C70A6NIJ9 312 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 ANKRD65E5RJM6 399 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 NPIPB9F8W1W9 429 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 ARPC2O15144 300 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 GSTA4O15217 222 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 SLC28A2O43868 658 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 TSPAN2O60636 221 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 FCMRO60667 390 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 MFN2O95140 757 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 H6PDO95479 791 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 STAMBPO95630 424 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 BCHEP06276 602 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 CHRM4P08173 479 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 UMPSP11172 480 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 POU3F2P20265 443 aaPredicted RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 ABCD3P28288 659 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 CRYBA2P53672 197 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 POLE2P56282 527 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 MLF1P58340 268 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 RHDQ02161 417 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 CHRNEQ04844 493 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 FLOT2Q14254 428 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 ZSWIM7Q19AV6 140 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms