RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 NFKBIDQ8NI38 313 aa20.14■□□□□ 0.81
RAB40B-207ENST00000572603 ZG16BQ96DA0 208 aa20.14■□□□□ 0.81
RAB40B-207ENST00000572603 TREX2Q9BQ50 279 aaPredicted RBP20.14■□□□□ 0.81
RAB40B-207ENST00000572603 TBL1XR1Q9BZK7 514 aa20.14■□□□□ 0.81
RAB40B-207ENST00000572603 HOXD1Q9GZZ0 328 aa20.14■□□□□ 0.81
RAB40B-207ENST00000572603 ASF1BQ9NVP2 202 aa20.14■□□□□ 0.81
RAB40B-207ENST00000572603 HEATR5AQ86XA9 2040 aa20.14■□□□□ 0.81
RAB40B-207ENST00000572603 TTLL8A6PVC2 850 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 FAM166BA8MTA8 275 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 B8ZZF3 427 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 NME4O00746 187 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 SCDO00767 359 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 GNB5O14775 395 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 WISP2O76076 250 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 ANGPTL1O95841 491 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 ZNF24P17028 368 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 MST1P26927 711 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 RNF144AP50876 292 aaPredicted RBP20.13■□□□□ 0.81
RAB40B-207ENST00000572603 SLC7A2P52569 658 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 MLLT10P55197 1068 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 PLAURQ03405 335 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 ART3Q13508 389 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 CYP51A1Q16850 503 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 PDZK1Q5T2W1 519 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 PRAMEF8Q5VWM4 474 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 PRAMEF7Q5VXH5 474 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 TIGD3Q6B0B8 471 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 FAM180AQ6UWF9 173 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 SLC15A3Q8IY34 581 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 TMEM251Q8N6I4 163 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 GATSQ8NAP1 163 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 OIT3Q8WWZ8 545 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 SH3GL1Q99961 368 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 HOPXQ9BPY8 73 aaPredicted RBP20.13■□□□□ 0.81
RAB40B-207ENST00000572603 UBQLN3Q9H347 655 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 BCL2L10Q9HD36 194 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 GMPR2Q9P2T1 348 aaKnown RBP20.13■□□□□ 0.81
RAB40B-207ENST00000572603 ABCD2Q9UBJ2 740 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 USP22Q9UPT9 525 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 C15orf41Q9Y2V0 281 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 DTNAQ9Y4J8 743 aa20.13■□□□□ 0.81
RAB40B-207ENST00000572603 NBASA2RRP1 2371 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 IGLV3-32A0A0A0MS00 114 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 OIP5O43482 229 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 CRYABP02511 175 aaKnown RBP20.12■□□□□ 0.81
RAB40B-207ENST00000572603 MASP1P48740 699 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 TDGF1P3P51864 188 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 PSME3P61289 254 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 CDK6Q00534 326 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 SCARB2Q14108 478 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 ZNF630Q2M218 657 aaPredicted RBP20.12■□□□□ 0.81
RAB40B-207ENST00000572603 PACS2Q86VP3 889 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 METTL25Q8N6Q8 603 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 FADS6Q8N9I5 356 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 ZNF527Q8NB42 609 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 FAR1Q8WVX9 515 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 NR4A3Q92570 626 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 NSL1Q96IY1 281 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 JSRP1Q96MG2 331 aaPredicted RBP20.12■□□□□ 0.81
RAB40B-207ENST00000572603 ZNF583Q96ND8 569 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 SLX1AQ9BQ83 275 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 SPATA9Q9BWV2 254 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 ZDHHC11Q9H8X9 412 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 CALML5Q9NZT1 146 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 SUCOQ9UBS9 1254 aaKnown RBP20.12■□□□□ 0.81
RAB40B-207ENST00000572603 L3MBTL1Q9Y468 752 aa20.12■□□□□ 0.81
RAB40B-207ENST00000572603 DNAJC13O75165 2243 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 AGAP5A6NIR3 686 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 CCT8L1PA6NM43 557 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 UBOX5O94941 541 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PGM3O95394 542 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 ESRRAP11474 423 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-207ENST00000572603 ELAVL4P26378 380 aaKnown RBP20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PCGF2P35227 344 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PCBP3P57721 371 aaKnown RBP20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PPIAP62937 165 aaKnown RBP20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PLGLB1Q02325 96 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 RBBP4Q09028 425 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 FGFBP1Q14512 234 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 OR5M10Q6IEU7 315 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 OR1J4Q8NGS1 313 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 BBS10Q8TAM1 723 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 CPT1CQ8TCG5 803 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PMM1Q92871 262 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 KLHDC3Q9BQ90 382 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 RSPO3Q9BXY4 272 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-207ENST00000572603 TSPAN10Q9H1Z9 355 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-207ENST00000572603 PPP4R1LQ9P1A2 415 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 FBXL2Q9UKC9 423 aa20.11■□□□□ 0.81
RAB40B-207ENST00000572603 A0A0G2JPF8 293 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 TMEM247A6NEH6 219 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 SERINC4A6NH21 518 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 FAM220BPB1ANY3 271 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 HNRNPCL2B2RXH8 293 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 HNRNPCL3B7ZW38 293 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 ACOT7O00154 380 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 NDUFB5O43674 189 aa20.1■□□□□ 0.81
RAB40B-207ENST00000572603 HNRNPCL1O60812 293 aaKnown RBP20.1■□□□□ 0.81
RAB40B-207ENST00000572603 BCAS1O75363 584 aaPredicted RBP20.1■□□□□ 0.81
RAB40B-207ENST00000572603 CELA3AP09093 270 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms