RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 KIF26AQ9ULI4 1882 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 FAM183AA6NL82 134 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SLC2A10O95528 541 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SHC1P29353 583 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 TRHRP34981 398 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CAPZA2P47755 286 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SHC2P98077 582 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SFXN4Q6P4A7 337 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ABHD17CQ6PCB6 329 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CEACAM19Q7Z692 300 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 OR2L5Q8NG80 312 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 OR9A2Q8NGT5 310 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 TRMT10AQ8TBZ6 339 aaKnown RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 GANCQ8TET4 914 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CD180Q99467 661 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 PPIL3Q9H2H8 161 aaKnown RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 KLHL31Q9H511 634 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 XKR8Q9H6D3 395 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ISG20L2Q9H9L3 353 aaKnown RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SLC23A1Q9UHI7 598 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CHP2O43745 196 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 PIP5K1CO60331 668 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 MOSPD3O75425 235 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 EIF4EP06730 217 aaKnown RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 AHRP35869 848 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ARFIP1P53367 373 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 CDK3Q00526 305 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ZBTB37Q5TC79 503 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 IL20RBQ6UXL0 311 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM255BQ8WV15 326 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 MS4A6EQ96DS6 147 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ELP4Q96EB1 424 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 COX14Q96I36 57 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 OR51J1Q9H342 316 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 MTHFD2LQ9H903 347 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ATP13A2Q9NQ11 1180 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 LYARQ9NX58 379 aaKnown RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 SLC7A7Q9UM01 511 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF443Q9Y2A4 671 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 MTCL1Q9Y4B5 1905 aaKnown RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 NUMA1Q14980 2115 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 RCBTB2O95199 551 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 BCL6P41182 706 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 STXBP1P61764 594 aaKnown RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 SLC3A1Q07837 685 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 HSD17B12Q53GQ0 312 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 CD276Q5ZPR3 534 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 NIPAL3Q6P499 406 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ANKRD33Q7Z3H0 272 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 GPR135Q8IZ08 494 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 DTX3Q8N9I9 347 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 SUSD6Q92537 303 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 RAB7BQ96AH8 199 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 OR52D1Q9H346 318 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 DEC1Q9P2X7 70 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 WDR45Q9Y484 360 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 PCYT1BQ9Y5K3 369 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 TEX13CA0A0J9YWL9 993 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 PRR23D1E9PI22 279 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 NFATC1O95644 943 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 PRR23D2P0DMB1 279 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 F3P13726 295 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 AGFG1P52594 562 aaKnown RBP10.04□□□□□ -0.8
CCDC40-207ENST00000572253 RAB8AP61006 207 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 RPL13AP3Q6NVV1 102 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 NRROSQ86YC3 692 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 OR8H3Q8N146 312 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 LINC01555Q8NAE3 123 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 KAT2AQ92830 837 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 NTNG1Q9Y2I2 539 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 SLC27A6Q9Y2P4 619 aa10.04□□□□□ -0.8
CCDC40-207ENST00000572253 ANTXRLA6NF34 631 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 RIIAD1A6NNX1 92 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 SLC22A5O76082 557 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 NTN1O95631 604 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 CERS1P27544 350 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 AP2S1P53680 142 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 SRP54P61011 504 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 RIPPLY1Q0D2K3 151 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 ZIC1Q15915 447 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 C18orf63Q68DL7 685 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM99Q8N816 258 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 BRIX1Q8TDN6 353 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 ZG16BQ96DA0 208 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 OMA1Q96E52 524 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 DEFB118Q96PH6 123 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 DHRS9Q9BPW9 319 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 MACROD1Q9BQ69 325 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF649Q9BS31 505 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 A0A1B0GVI7 797 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 C7orf66A4D0T2 115 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 TRAPPC13A5PLN9 417 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PCDH8O95206 1070 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 CLTBP09497 229 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PRG2P13727 222 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 M6PRP20645 277 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 GALEQ14376 348 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms