RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 WSB1Q9Y6I7 421 aa1.86□□□□□ -2.11
UBR1-209ENST00000569243 TMEM89A2RUT3 159 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 USP27XA6NNY8 438 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 C19orf81C9J6K1 198 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 E9PMD0 336 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 H3BMH7 237 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 SGK494L7N484 410 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 ZNF324O75467 553 aaPredicted RBP1.85□□□□□ -2.11
UBR1-209ENST00000569243 THRBP10828 461 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 VDRP11473 427 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 HTR1EP28566 365 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 ADORA2BP29275 332 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 HNRNPFP52597 415 aaKnown RBP1.85□□□□□ -2.11
UBR1-209ENST00000569243 VLDLRP98155 873 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 PLOD1Q02809 727 aaPredicted RBP1.85□□□□□ -2.11
UBR1-209ENST00000569243 SRYQ05066 204 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 AGKQ53H12 422 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 IL23RQ5VWK5 629 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 LIPKQ5VXJ0 399 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 PNCKQ6P2M8 343 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 TOM1L2Q6ZVM7 507 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 ANKRD23Q86SG2 305 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 ZNF786Q8N393 782 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 OR9A4Q8NGU2 314 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 DNAJA4Q8WW22 397 aaPredicted RBP1.85□□□□□ -2.11
UBR1-209ENST00000569243 ART4Q93070 314 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 NOL4LQ96MY1 436 aaPredicted RBP1.85□□□□□ -2.11
UBR1-209ENST00000569243 SH2D2AQ9NP31 389 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 WDR45Q9Y484 360 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 MTCL1Q9Y4B5 1905 aaKnown RBP1.85□□□□□ -2.11
UBR1-209ENST00000569243 PARD3Q8TEW0 1356 aa1.85□□□□□ -2.11
UBR1-209ENST00000569243 SMIM28A0A1B0GU29 152 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 TTC26A0AVF1 554 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 PSMB11A5LHX3 300 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 SAGE2PA6NJ88 616 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 SUPT7LO94864 414 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 CXCL10P02778 98 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 IGHV4-34P06331 123 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 ABHD2P08910 425 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 ZNF44P15621 663 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 H2AFXP16104 143 aaPredicted RBP1.84□□□□□ -2.11
UBR1-209ENST00000569243 PTPN6P29350 595 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 CTNNA1P35221 906 aaKnown RBP1.84□□□□□ -2.11
UBR1-209ENST00000569243 UGT1A5P35504 534 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 DHPSP49366 369 aaPredicted RBP1.84□□□□□ -2.11
UBR1-209ENST00000569243 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
UBR1-209ENST00000569243 UBE2V2Q15819 145 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 FAM120AOSQ5T036 256 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 ZBTB44Q8NCP5 570 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 ST7LQ8TDW4 575 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 IL1F10Q8WWZ1 152 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 MYDGFQ969H8 173 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 TADA1Q96BN2 335 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 COQ7Q99807 217 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 NACA2Q9H009 215 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 NXF3Q9H4D5 531 aaKnown RBP1.84□□□□□ -2.11
UBR1-209ENST00000569243 CYP39A1Q9NYL5 469 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 GMPPBQ9Y5P6 360 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 TEX264Q9Y6I9 313 aa1.84□□□□□ -2.11
UBR1-209ENST00000569243 DHX29Q7Z478 1369 aaKnown RBP1.84□□□□□ -2.12
UBR1-209ENST00000569243 TRBV6-6A0A0A6YYG2 114 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 A0A0U1RRA0 63 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 TUBAL3A6NHL2 446 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 HSF2BPO75031 334 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 VDAC1P21796 283 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 CTRLP40313 264 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 PMELP40967 661 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 RPL8P62917 257 aaKnown RBP1.83□□□□□ -2.12
UBR1-209ENST00000569243 MYBPC1Q00872 1141 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 GALK2Q01415 458 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 BTG3Q14201 252 aaPredicted RBP1.83□□□□□ -2.12
UBR1-209ENST00000569243 KARSQ15046 597 aaKnown RBP1.83□□□□□ -2.12
UBR1-209ENST00000569243 CDKN3Q16667 212 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 ZNF630Q2M218 657 aaPredicted RBP1.83□□□□□ -2.12
UBR1-209ENST00000569243 C2orf76Q3KRA6 126 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 WDR74Q6RFH5 385 aaPredicted RBP1.83□□□□□ -2.12
UBR1-209ENST00000569243 ARSKQ6UWY0 536 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 TMEM184AQ6ZMB5 413 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 CCDC170Q8IYT3 715 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 ARIH2OSQ8N7S6 290 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 GPATCH11Q8N954 259 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 C20orf203Q8NBC4 194 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 SUMF2Q8NBJ7 301 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 ZNF540Q8NDQ6 660 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 TMEM185AQ8NFB2 350 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 NEIL3Q8TAT5 605 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 ZNF560Q96MR9 790 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 DDX47Q9H0S4 455 aaKnown RBP1.83□□□□□ -2.12
UBR1-209ENST00000569243 SIRPDQ9H106 197 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 COG4Q9H9E3 785 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 CAB39LQ9H9S4 337 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 USP16Q9Y5T5 823 aa1.83□□□□□ -2.12
UBR1-209ENST00000569243 A0A0J9YXY3 114 aa1.82□□□□□ -2.12
UBR1-209ENST00000569243 ZBTB14O43829 449 aa1.82□□□□□ -2.12
UBR1-209ENST00000569243 ICOSLGO75144 302 aa1.82□□□□□ -2.12
UBR1-209ENST00000569243 NPIPB7O75200 414 aa1.82□□□□□ -2.12
UBR1-209ENST00000569243 CD1BP29016 333 aa1.82□□□□□ -2.12
UBR1-209ENST00000569243 NMT1P30419 496 aaKnown RBP1.82□□□□□ -2.12
UBR1-209ENST00000569243 AXLP30530 894 aa1.82□□□□□ -2.12
UBR1-209ENST00000569243 GCKP35557 465 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms