RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 HTR1EP28566 365 aa11□□□□□ -0.65
FANCA-231ENST00000568626 CASP3P42574 277 aa11□□□□□ -0.65
FANCA-231ENST00000568626 PCBP3P57721 371 aaKnown RBP11□□□□□ -0.65
FANCA-231ENST00000568626 KCNJ2P63252 427 aa11□□□□□ -0.65
FANCA-231ENST00000568626 LARS2Q15031 903 aaKnown RBP11□□□□□ -0.65
FANCA-231ENST00000568626 LIN52Q52LA3 116 aa11□□□□□ -0.65
FANCA-231ENST00000568626 CCDC80Q76M96 950 aa11□□□□□ -0.65
FANCA-231ENST00000568626 MDGA2Q7Z553 956 aa11□□□□□ -0.65
FANCA-231ENST00000568626 CMIPQ8IY22 773 aa11□□□□□ -0.65
FANCA-231ENST00000568626 LSM14AQ8ND56 463 aaKnown RBP11□□□□□ -0.65
FANCA-231ENST00000568626 GRHL3Q8TE85 626 aa11□□□□□ -0.65
FANCA-231ENST00000568626 WDR60Q8WVS4 1066 aa11□□□□□ -0.65
FANCA-231ENST00000568626 RASSF5Q8WWW0 418 aa11□□□□□ -0.65
FANCA-231ENST00000568626 PNPLA2Q96AD5 504 aa11□□□□□ -0.65
FANCA-231ENST00000568626 MCUR1Q96AQ8 359 aa11□□□□□ -0.65
FANCA-231ENST00000568626 TMEM41AQ96HV5 264 aa11□□□□□ -0.65
FANCA-231ENST00000568626 ZNF597Q96LX8 424 aa11□□□□□ -0.65
FANCA-231ENST00000568626 FAM173AQ9BQD7 235 aa11□□□□□ -0.65
FANCA-231ENST00000568626 DOHHQ9BU89 302 aa11□□□□□ -0.65
FANCA-231ENST00000568626 SLC25A18Q9H1K4 315 aa11□□□□□ -0.65
FANCA-231ENST00000568626 MMADHCQ9H3L0 296 aaPredicted RBP11□□□□□ -0.65
FANCA-231ENST00000568626 PIF1Q9H611 641 aa11□□□□□ -0.65
FANCA-231ENST00000568626 ARMC7Q9H6L4 198 aa11□□□□□ -0.65
FANCA-231ENST00000568626 MAGEL2Q9UJ55 1249 aa11□□□□□ -0.65
FANCA-231ENST00000568626 BOKQ9UMX3 212 aaPredicted RBP11□□□□□ -0.65
FANCA-231ENST00000568626 SLC35A3Q9Y2D2 325 aa11□□□□□ -0.65
FANCA-231ENST00000568626 IFT52Q9Y366 437 aa11□□□□□ -0.65
FANCA-231ENST00000568626 DTNAQ9Y4J8 743 aa11□□□□□ -0.65
FANCA-231ENST00000568626 WIF1Q9Y5W5 379 aa11□□□□□ -0.65
FANCA-231ENST00000568626 GPC6Q9Y625 555 aaPredicted RBP11□□□□□ -0.65
FANCA-231ENST00000568626 SERINC4A6NH21 518 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 K7EM74 188 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 NDUFB5O43674 189 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 NID1P14543 1247 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 IL7RP16871 459 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 CNR1P21554 472 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 ME2P23368 584 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 ELAVL4P26378 380 aaKnown RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 PRKAR1BP31321 381 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 ADH7P40394 386 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 MASP1P48740 699 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 CD97P48960 835 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 NCALDP61601 193 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 ELOAQ14241 798 aaKnown RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 FGFBP1Q14512 234 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 KLHL26Q53HC5 615 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 EIPR1Q53HC9 387 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 RPS26P11Q5JNZ5 115 aaPredicted RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 PDZK1Q5T2W1 519 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 PRAMEF20Q5VT98 475 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 RNF220Q5VTB9 566 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 RPUSD3Q6P087 351 aaKnown RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 EIF3MQ7L2H7 374 aaKnown RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 PTRH1Q86Y79 214 aaKnown RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 RBMXL3Q8N7X1 1067 aaKnown RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 ZNF614Q8N883 585 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 EXD3Q8N9H8 876 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 OR4C3Q8NH37 302 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 OR52P1PQ8NH57 321 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 RNF145Q96MT1 663 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 FRMD6Q96NE9 622 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 THTPAQ9BU02 230 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 ZNF71Q9NQZ8 489 aaPredicted RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.99□□□□□ -0.65
FANCA-231ENST00000568626 FLRT3Q9NZU0 649 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 B4GALT7Q9UBV7 327 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 SEC14L3Q9UDX4 400 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 CD300AQ9UGN4 299 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 ZNF232Q9UNY5 417 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 CSAG2Q9Y5P2 127 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 CNTRLQ7Z7A1 2325 aa10.99□□□□□ -0.65
FANCA-231ENST00000568626 TLN1Q9Y490 2541 aaKnown RBP10.98□□□□□ -0.65
FANCA-231ENST00000568626 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
FANCA-231ENST00000568626 IGLV3-32A0A0A0MS00 114 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 NPIPA5A0A0B4J1W7 369 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 NPIPA7E9PJI5 369 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 ACOT7O00154 380 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 CXCR6O00574 342 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 SNPHO15079 494 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 SCO2O43819 266 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 PEX1O43933 1283 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 STAMBPO95630 424 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 ANGPTL1O95841 491 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 PABPC4LP0CB38 370 aaKnown RBP10.98□□□□□ -0.65
FANCA-231ENST00000568626 NPIPA8P0DM63 369 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 UBL4AP11441 157 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 GGT1P19440 569 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 AQP1P29972 269 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 PTGDSP41222 190 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 ST13P50502 369 aaKnown RBP10.98□□□□□ -0.65
FANCA-231ENST00000568626 GAS1P54826 345 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 SUMO3P55854 103 aaPredicted RBP10.98□□□□□ -0.65
FANCA-231ENST00000568626 C17orf67Q0P5P2 114 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 KLRB1Q12918 225 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 CEACAM7Q14002 265 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 ZSCAN26Q16670 478 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 SLC6A19Q695T7 634 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
FANCA-231ENST00000568626 OLIG3Q7RTU3 272 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms