RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 OR2M3Q8NG83 312 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 SPDL1Q96EA4 605 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 THOC1Q96FV9 657 aaKnown RBP11.82□□□□□ -0.52
CLK3-224ENST00000568605 SFXN2Q96NB2 322 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 DSN1Q9H410 356 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 RAD21L1Q9H4I0 556 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 POLE3Q9NRF9 147 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 PNPLA3Q9NST1 481 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 FGFR1OP2Q9NVK5 253 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 CCDC167Q9P0B6 97 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 SPRR3Q9UBC9 169 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 FBXL2Q9UKC9 423 aa11.82□□□□□ -0.52
CLK3-224ENST00000568605 IGLV3-32A0A0A0MS00 114 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 TMEM247A6NEH6 219 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 LINC01387J3KSC0 135 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 ZNHIT1O43257 154 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 GSNP06396 782 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 ZCCHC18P0CG32 403 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 AGAP20933 346 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 MDH1P40925 334 aaKnown RBP11.81□□□□□ -0.52
CLK3-224ENST00000568605 CDKN2CP42773 168 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 ATP12AP54707 1039 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 GXYLT1Q4G148 440 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 EIPR1Q53HC9 387 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 C1orf185Q5T7R7 199 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 RAET1LQ5VY80 246 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 METTL21CQ5VZV1 264 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 VASNQ6EMK4 673 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 OR5M10Q6IEU7 315 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 XKRXQ6PP77 449 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 B3GNT6Q6ZMB0 384 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 RNF130Q86XS8 419 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 OR5M9Q8NGP3 310 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 RFWD2Q8NHY2 731 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 PHOSPHO1Q8TCT1 267 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 DUSP19Q8WTR2 217 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 XAGE5Q8WWM1 108 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 ABTB1Q969K4 478 aaPredicted RBP11.81□□□□□ -0.52
CLK3-224ENST00000568605 VPS33AQ96AX1 596 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 SDF2Q99470 211 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 INPP5KQ9BT40 448 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 TMEM120AQ9BXJ8 343 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 NMUR2Q9GZQ4 415 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 PRDM14Q9GZV8 571 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 ZNF350Q9GZX5 532 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 SERHL2Q9H4I8 314 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 THUMPD1Q9NXG2 353 aaKnown RBP11.81□□□□□ -0.52
CLK3-224ENST00000568605 STOML1Q9UBI4 398 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 CAMK2AQ9UQM7 478 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 LIPT1Q9Y234 373 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 SLC6A5Q9Y345 797 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 WDR45Q9Y484 360 aa11.81□□□□□ -0.52
CLK3-224ENST00000568605 A0A087WZY1 265 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 DYNC1I1O14576 645 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 GUSBP08236 651 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 OR12D1P0DN82 309 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 HK1P19367 917 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 PPIBP23284 216 aaKnown RBP11.8□□□□□ -0.52
CLK3-224ENST00000568605 CHMP24386 653 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 ZFP36L2P47974 494 aaKnown RBP11.8□□□□□ -0.52
CLK3-224ENST00000568605 ZNF41P51814 821 aaPredicted RBP11.8□□□□□ -0.52
CLK3-224ENST00000568605 ARFIP2P53365 341 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 SUMO3P55854 103 aaPredicted RBP11.8□□□□□ -0.52
CLK3-224ENST00000568605 GPAT3Q53EU6 434 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 AGKQ53H12 422 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 HEPHL1Q6MZM0 1159 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 C3P1Q6ZMU1 363 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 ZAR1Q86SH2 424 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 MRGPRGQ86SM5 289 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 TMCO5AQ8N6Q1 288 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 GATSQ8NAP1 163 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 OR4C3Q8NH37 302 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 PNPT1Q8TCS8 783 aaKnown RBP11.8□□□□□ -0.52
CLK3-224ENST00000568605 RND1Q92730 232 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 ROPN1LQ96C74 230 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 C1GALT1C1Q96EU7 318 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 DMRTA2Q96SC8 542 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 PIGQQ9BRB3 760 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 UGT2B28Q9BY64 529 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 FBXO34Q9NWN3 711 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 CALML5Q9NZT1 146 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 MED11Q9P086 117 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 P2RX2Q9UBL9 471 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 TNFRSF10DQ9UBN6 386 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 CORO2BQ9UQ03 480 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 DTNAQ9Y4J8 743 aa11.8□□□□□ -0.52
CLK3-224ENST00000568605 ASH1LQ9NR48 2969 aaKnown RBP11.8□□□□□ -0.52
CLK3-224ENST00000568605 A0A096LPI6 279 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 NPIPA5A0A0B4J1W7 369 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 AHRRA9YTQ3 701 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 NPIPA7E9PJI5 369 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 H0Y3Z8 333 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 HMGN4O00479 90 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 ANGPT2O15123 496 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 HCRTR2O43614 444 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 KIAA0513O60268 411 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 NUDT14O95848 222 aa11.79□□□□□ -0.52
CLK3-224ENST00000568605 NPIPA8P0DM63 369 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms