RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 HHATLQ9HCP6 504 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 CISD1Q9NZ45 108 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ALPK2Q86TB3 2170 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 C7orf72A4D263 438 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 DPRXA6NFQ7 191 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 FAM187AA6NFU0 413 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 UTS2O95399 124 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 MAGEA4P43358 317 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 NCBP2P52298 156 aaKnown RBP eCLIP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 CDH11P55287 796 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 RAE1P78406 368 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 CSTF3Q12996 717 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 ITGADQ13349 1161 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 P2RY6Q15077 328 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 RNPS1Q15287 305 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 SPIN4Q56A73 249 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 AGAP6Q5VW22 663 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 TMEM107Q6UX40 140 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 SEZ6L2Q6UXD5 910 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 APOOLQ6UXV4 268 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 RPS27LQ71UM5 84 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 CEP112Q8N8E3 955 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 BANPQ8N9N5 519 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 RNF128Q8TEB7 428 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 ZNF483Q8TF39 744 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 ABHD3Q8WU67 409 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 SLC9A6Q92581 669 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 MRRFQ96E11 262 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 REXO5Q96IC2 774 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 KLHL15Q96M94 604 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 RNF145Q96MT1 663 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 TMEM185BQ9H7F4 350 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 DDX18Q9NVP1 670 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 GRHL1Q9NZI5 618 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 KLHL13Q9P2N7 655 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 C19orf53Q9UNZ5 99 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 B3GALT5Q9Y2C3 310 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 SAR1BQ9Y6B6 198 aa10.49□□□□□ -0.73
GTF3C1-209ENST00000568569 A0A0J9YW62 118 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 A0A1W2PRB8 838 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ELOA3DA6NLF2 546 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ALG1L2C9J202 215 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 PPP6CO00743 305 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 UBFD1O14562 309 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 NDUFB5O43674 189 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 RAMP1O60894 148 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 KCNH1O95259 989 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 PSMG1O95456 288 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 KRT6AP02538 564 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 OPN1LWP04000 364 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 KRT6BP04259 564 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 JUNP05412 331 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 SLC25A16P16260 332 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 SRD5A1P18405 259 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 TSPAN8P19075 237 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 PSMA4P25789 261 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 GSTM5P46439 218 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 KRT6CP48668 564 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ZNF41P51814 821 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 PLTPP55058 493 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 CDH13P55290 713 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 CARD18P57730 90 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 C21orf58P58505 322 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 IRX1P78414 480 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ACSM2AQ08AH3 577 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 UAP1Q16222 522 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ZNF239Q16600 458 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 PLPPR5Q32ZL2 321 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 GRAMD1BQ3KR37 738 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ELOA3BQ3SY89 546 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 TCHHL1Q5QJ38 904 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ACSM2BQ68CK6 577 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 CYB5R2Q6BCY4 276 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 NUFIP2Q7Z417 695 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 TDRPQ86YL5 185 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 OR2L13Q8N349 312 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ELOA3Q8NG57 546 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 C16orf78Q8WTQ4 265 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 ROBO4Q8WZ75 1007 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 OSTF1Q92882 214 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 CPNE4Q96A23 557 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 LMF2Q9BU23 707 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 CACNG6Q9BXT2 260 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 C3orf14Q9HBI5 128 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 GP6Q9HCN6 339 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 MED17Q9NVC6 651 aa10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 DMGDHQ9UI17 866 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-209ENST00000568569 MYO1GB0I1T2 1018 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 UPK1AO00322 258 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 MANBAO00462 879 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 OR4F21O95013 312 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 NTN1O95631 604 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 ADAP00813 363 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 CHN1P15882 459 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 ZNF16P17020 682 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 DDCP20711 480 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 TIA1P31483 386 aaKnown RBP eCLIP10.47□□□□□ -0.736e-6■□□□□ 11.3
GTF3C1-209ENST00000568569 GABRA3P34903 492 aa10.47□□□□□ -0.73
GTF3C1-209ENST00000568569 CAV1Q03135 178 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms