RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MMP11P24347 488 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CDH5P33151 784 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 UGT1A5P35504 534 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 FEN1P39748 380 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 RPL13AP40429 203 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 HTR2BP41595 481 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 MAGEA9P43362 315 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ARRB1P49407 418 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PCYT1AP49585 367 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 NOVA1P51513 510 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PROK1P58294 105 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PLP1P60201 277 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 TNNC1P63316 161 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 OGDHQ02218 1023 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 COTL1Q14019 142 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 STK38Q15208 465 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 EZH2Q15910 746 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 HLFQ16534 295 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 RFTN2Q52LD8 501 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 TEX44Q53QW1 395 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 SFT2D3Q587I9 215 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 DMRTC1Q5HYR2 192 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 SPANXN4Q5MJ08 99 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 C1orf189Q5VU69 101 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 RHBDD2Q6NTF9 364 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 Q6ZVQ6 151 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 SSX9Q7RTT3 188 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 TSEN54Q7Z6J9 526 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ANKRD37Q7Z713 158 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ISCA2Q86U28 154 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 RANBP3LQ86VV4 465 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CATSPERDQ86XM0 798 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 HPS6Q86YV9 775 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ERI1Q8IV48 349 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CCDC50Q8IVM0 306 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CD302Q8IX05 232 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC35F2Q8IXU6 374 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 DND1Q8IYX4 353 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 GABRG1Q8N1C3 465 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM86B1Q8N7N1 296 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 KCNH5Q8NCM2 988 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM104Q8NE00 496 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PROKR2Q8NFJ6 384 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 DMBX1Q8NFW5 382 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 OR2L3Q8NG85 312 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 DDI1Q8WTU0 396 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 DDB2Q92466 427 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 KIFAP3Q92845 792 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PNPLA2Q96AD5 504 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 C7orf34Q96L11 122 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 FUCA2Q9BTY2 467 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 BBS2Q9BXC9 721 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PRRG3Q9BZD7 231 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 OR2AG1Q9H205 316 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ELOVL6Q9H5J4 265 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 IKZF5Q9H5V7 419 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 AZI2Q9H6S1 392 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 STARD5Q9NSY2 213 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 TAS2R16Q9NYV7 291 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 POU2F3Q9UKI9 436 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 MAN1B1Q9UKM7 699 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 STAP1Q9ULZ2 295 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 FAF1Q9UNN5 650 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 POLDIP2Q9Y2S7 368 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PPP2R2CQ9Y2T4 447 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 STARD10Q9Y365 291 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 WIPI2Q9Y4P8 454 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 HS3ST3B1Q9Y662 390 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CUX1P39880 1505 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PTPRUQ92729 1446 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ABCC8Q09428 1581 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 INSRP06213 1382 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 SHROOM2Q13796 1616 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ADCY10Q96PN6 1610 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 IGLV5-52A0A0A0MRZ9 124 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 IGLV9-49A0A0B4J1Y8 123 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 A0A1W2PPI3 338 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 OR5H15A6NDH6 313 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF840PA6NDX5 716 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 FBLL1A6NHQ2 334 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 E5RJQ4 531 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC1A7O00341 560 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ATP6V0E1O15342 81 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RS1O15537 224 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ATP5LO75964 103 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 IGSF6O95976 241 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 PRKCGP05129 697 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 SERPIND1P05546 499 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ANXA5P08758 320 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM157CP0CG43 387 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF24P17028 368 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RPL35AP18077 110 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 AADACP22760 399 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 CA6P23280 308 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 GIFP27352 417 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 HMOX2P30519 316 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 LCN1P31025 176 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 HOXD3P31249 432 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 YWHABP31946 246 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms