RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 TMEM41AQ96HV5 264 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 ZNF597Q96LX8 424 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 SIGLEC12Q96PQ1 595 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 ZNF607Q96SK3 696 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 C1orf21Q9H246 121 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 IL1RL2Q9HB29 575 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 BCL2L10Q9HD36 194 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 SLC6A13Q9NSD5 602 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 ANKRD10Q9NXR5 420 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 QPCTLQ9NXS2 382 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 SLAMF8Q9P0V8 285 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 ZNF232Q9UNY5 417 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 NINQ8N4C6 2090 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 POLEQ07864 2286 aa17.31■□□□□ 0.36
SYNGR3-203ENST00000563869 ALG1L2C9J202 215 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 TNFRSF21O75509 655 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 SERPINB7O75635 380 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 UTS2O95399 124 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 IFNA14P01570 189 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 ARAFP10398 606 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 ETS2P15036 469 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 MSX1P28360 303 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 CASP3P42574 277 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 RFX3P48380 749 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 MASP1P48740 699 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 GTDC1Q4AE62 458 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 ZNF468Q5VIY5 522 aaPredicted RBP17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 FAM180AQ6UWF9 173 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 SLC22A16Q86VW1 577 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 MSRB3Q8IXL7 192 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 PRR22Q8IZ63 422 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 PGAM4Q8N0Y7 254 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 CLEC4FQ8N1N0 589 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 OR4N2Q8NGD1 307 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 RNF138Q8WVD3 245 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 AURKBQ96GD4 344 aaPredicted RBP17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 REXO5Q96IC2 774 aaKnown RBP17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 SERHL2Q9H4I8 314 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 CNOT11Q9UKZ1 510 aaKnown RBP17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 SLC35A3Q9Y2D2 325 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 IFT52Q9Y366 437 aa17.3■□□□□ 0.36
SYNGR3-203ENST00000563869 GXYLT2A0PJZ3 443 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 PRORSD1PA6NEY8 169 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 CCT8L1PA6NM43 557 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 FXYD1O00168 92 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 LRRTM2O43300 516 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 PEX1O43933 1283 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 KIAA0513O60268 411 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 GMNNO75496 209 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 DBIP07108 87 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 TFPTP0C1Z6 253 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 CYP4B1P13584 511 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 ETFAP13804 333 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 PRF1P14222 555 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 ADH7P40394 386 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 RIPPLY3P57055 190 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 EEFSECP57772 596 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 CDK6Q00534 326 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 VEZF1Q14119 521 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 GANABQ14697 944 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 LARS2Q15031 903 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 HYAL4Q2M3T9 481 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 FIGNL1Q6PIW4 674 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 GALNTL5Q7Z4T8 443 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 WDR53Q7Z5U6 358 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 NET1Q7Z628 596 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 ZFP62Q8NB50 900 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 HIPK4Q8NE63 616 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 OR5M3Q8NGP4 307 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 RAB8BQ92930 207 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 POP5Q969H6 163 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 FRMD6Q96NE9 622 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 GPATCH1Q9BRR8 931 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 PTGES2Q9H7Z7 377 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 DTNAQ9Y4J8 743 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 WIF1Q9Y5W5 379 aa17.29■□□□□ 0.36
SYNGR3-203ENST00000563869 DIDO1Q9BTC0 2240 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 NDUFB5O43674 189 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 ZNF354AO60765 605 aaPredicted RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 H6PDO95479 791 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 THBS1P07996 1170 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 CCL3P10147 92 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 UQCRBP14927 111 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 GCKP35557 465 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 MTPNP58546 118 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 ZNF141Q15928 474 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 SAMD4BQ5PRF9 694 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 COX20Q5RI15 118 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 PATL1Q86TB9 770 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 CATSPER1Q8NEC5 780 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 TOR1AIP2Q8NFQ8 470 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 OR2M7Q8NG81 312 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 SLC38A5Q8WUX1 472 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 TREX2Q9BQ50 279 aaPredicted RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 ZFP64Q9NPA5 681 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 KLHL1Q9NR64 748 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 PPP4R1LQ9P1A2 415 aa17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-203ENST00000563869 FAM220BPB1ANY3 271 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms