RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TNFRSF17Q02223 184 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 FZD5Q13467 585 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 SMARCD3Q6STE5 483 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 ZNF836Q6ZNA1 936 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 C11orf74Q86VG3 221 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 UBE2J2Q8N2K1 259 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 BBS1Q8NFJ9 593 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 KAT2AQ92830 837 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 PMM1Q92871 262 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.2□□□□□ -0.46
USB1-207ENST00000563149 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 B3GAT2Q9NPZ5 323 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 TRPV5Q9NQA5 729 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 PLSCR3Q9NRY6 295 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CYSLTR2Q9NS75 346 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 SLC7A7Q9UM01 511 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 ZFR2Q9UPR6 939 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CKAP5Q14008 2032 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 A0A1W2PS29 197 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 A6NL46 340 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 C12orf71A8MTZ7 269 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 PIP5K1CO60331 668 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 RCBTB2O95199 551 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
USB1-207ENST00000563149 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
USB1-207ENST00000563149 BMP7P18075 431 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 NDUFS1P28331 727 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 TALDO1P37837 337 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 ZNF136P52737 540 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 ATP12AP54707 1039 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 GNG2P59768 71 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 RPS21P63220 83 aaKnown RBP12.19□□□□□ -0.46
USB1-207ENST00000563149 EEF1A1P68104 462 aaKnown RBP12.19□□□□□ -0.46
USB1-207ENST00000563149 EFR3AQ14156 821 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 GALEQ14376 348 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 LTB4RQ15722 352 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 SDE2Q6IQ49 451 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 NIPAL3Q6P499 406 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 VASH1Q7L8A9 365 aaPredicted RBP12.19□□□□□ -0.46
USB1-207ENST00000563149 FAM20CQ8IXL6 584 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 GPALPP1Q8IXQ4 340 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 SIRT6Q8N6T7 355 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 SLC16A11Q8NCK7 471 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 OR4K14Q8NGD5 310 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 OR51G2Q8NGK0 314 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 CDS1Q92903 461 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 HS6ST2Q96MM7 605 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 FCRL4Q96PJ5 515 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 CD180Q99467 661 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 PRSS27Q9BQR3 290 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 ALG8Q9BVK2 526 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 PIGUQ9H490 435 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 TRIM36Q9NQ86 728 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 OR6C2Q9NZP2 312 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 EXTL2Q9UBQ6 330 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 MALT1Q9UDY8 824 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 ZNF223Q9UK11 482 aaPredicted RBP12.19□□□□□ -0.46
USB1-207ENST00000563149 TMEM5Q9Y2B1 443 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 MYO10Q9HD67 2058 aa12.19□□□□□ -0.46
USB1-207ENST00000563149 C2orf92A0A1B0GVN3 265 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 FAM86C2PA6NEL3 165 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SLC22A31A6NKX4 558 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ISM1B1AKI9 464 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 INMT-MINDY4F8WBC2 141 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 BHLHE40O14503 412 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 FMO6PO60774 539 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 NCR1O76036 304 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SLC2A10O95528 541 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 DBIP07108 87 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 ARSBP15848 533 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ELK1P19419 428 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 RPS4Y1P22090 263 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 SGCGQ13326 291 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 MAB21L1Q13394 359 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ENPP2Q13822 863 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 CAMK1Q14012 370 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 FGL2Q14314 439 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 CLPPQ16740 277 aaPredicted RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 Q5BKY6 102 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ZNF57Q68EA5 555 aaPredicted RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 FAM111BQ6SJ93 734 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 NUDT18Q6ZVK8 323 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 UTS2BQ765I0 119 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ASPGQ86U10 573 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ZNF619Q8N2I2 560 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 LNX2Q8N448 690 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 OR7G2Q8NG99 324 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 JPH3Q8WXH2 748 aaPredicted RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
USB1-207ENST00000563149 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms