RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 TNMDQ9H2S6 317 aa1.97□□□□□ -2.09
CHD9-207ENST00000562806 PPDPFQ9H3Y8 114 aa1.97□□□□□ -2.09
CHD9-207ENST00000562806 KAT8Q9H7Z6 458 aaKnown RBP1.97□□□□□ -2.09
CHD9-207ENST00000562806 MARCH5Q9NX47 278 aa1.97□□□□□ -2.09
CHD9-207ENST00000562806 CNOT2Q9NZN8 540 aaKnown RBP1.97□□□□□ -2.09
CHD9-207ENST00000562806 OR1A1Q9P1Q5 309 aa1.97□□□□□ -2.09
CHD9-207ENST00000562806 ONECUT1Q9UBC0 465 aa1.97□□□□□ -2.09
CHD9-207ENST00000562806 PLA2G4CQ9UP65 541 aa1.97□□□□□ -2.09
CHD9-207ENST00000562806 ASTN1O14525 1302 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CUX2O14529 1486 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 TDRD6O60522 2096 aaKnown RBP1.96□□□□□ -2.1
CHD9-207ENST00000562806 RNF103-CHMP3A0A140T963 221 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 SAGE2PA6NJ88 616 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 H0YL77 283 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CASKO14936 926 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 LATO43561 262 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 ZNF254O75437 659 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 SCRG1O75711 98 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 SLC4A1P02730 911 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CSF2P04141 144 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 ALPPP05187 535 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 HPNP05981 417 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 GSTT2P0CG29 244 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 GSTT2BP0CG30 244 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 RRASP10301 218 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 ALPPL2P10696 532 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CLUP10909 449 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 STMN1P16949 149 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 ATP5A1P25705 553 aaKnown RBP1.96□□□□□ -2.1
CHD9-207ENST00000562806 ADORA2BP29275 332 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 BTDP43251 543 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 NAPAP54920 295 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 RPS8P62241 208 aaKnown RBP1.96□□□□□ -2.1
CHD9-207ENST00000562806 GABPB1Q06547 395 aaPredicted RBP1.96□□□□□ -2.1
CHD9-207ENST00000562806 AP1B1Q10567 949 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 TFDP1Q14186 410 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 MPPED2Q15777 294 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 AANATQ16613 207 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CDKN3Q16667 212 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 ZNF658BQ4V348 819 aaPredicted RBP1.96□□□□□ -2.1
CHD9-207ENST00000562806 SLC10A5Q5PT55 438 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 OR6B2Q6IFH4 312 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 IRGCQ6NXR0 463 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CXCL17Q6UXB2 119 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 LPCAT2Q7L5N7 544 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 HSD11B1LQ7Z5J1 315 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 TGIF2LYQ8IUE0 185 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 OR56B1Q8NGI3 324 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 OR2A12Q8NGT7 310 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 PSMG2Q969U7 264 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CCDC47Q96A33 483 aaKnown RBP1.96□□□□□ -2.1
CHD9-207ENST00000562806 SPATA13Q96N96 652 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CAB39LQ9H9S4 337 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 C1orf123Q9NWV4 160 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 CD274Q9NZQ7 290 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 METP08581 1390 aa1.96□□□□□ -2.1
CHD9-207ENST00000562806 TRIM64A6NGJ6 449 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 TRIM64BA6NI03 449 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 RASGRF2O14827 1237 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 CA11O75493 328 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 STX11O75558 287 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 MT-ATP6P00846 226 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 IGKV3-11P04433 115 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 HBQ1P09105 142 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 ARF4P18085 180 aaPredicted RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 TSPAN8P19075 237 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 SERPINA2P20848 420 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 GCKP35557 465 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 PLK1P53350 603 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 SLC26A5P58743 744 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 RPL8P62917 257 aaKnown RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 NTHL1P78549 312 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 CKAP4Q07065 602 aaKnown RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 PVRIGQ6DKI7 326 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 LRRC8BQ6P9F7 803 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 WDR74Q6RFH5 385 aaPredicted RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 RBM43Q6ZSC3 357 aaKnown RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 TMEM26Q6ZUK4 368 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 ZNF589Q86UQ0 364 aaPredicted RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 C17orf82Q86X59 251 aaPredicted RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 SNX32Q86XE0 403 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 CERS5Q8N5B7 392 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 ALLCQ8N6M5 410 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 ZNF713Q8N859 430 aaPredicted RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 Q8N9L7 120 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 OR52E1Q8NGJ3 308 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 OR9A4Q8NGU2 314 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 TRUB1Q8WWH5 349 aaKnown RBP1.95□□□□□ -2.1
CHD9-207ENST00000562806 SLC5A11Q8WWX8 675 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 UPRTQ96BW1 309 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 TBCDQ9BTW9 1192 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 CCSER1Q9C0I3 900 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 ZDHHC11Q9H8X9 412 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 SH2D2AQ9NP31 389 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 NANSQ9NR45 359 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 IL20RAQ9UHF4 553 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 ATP6V1HQ9UI12 483 aa1.95□□□□□ -2.1
CHD9-207ENST00000562806 RAB26Q9ULW5 256 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms