RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EEF1E1O43324 174 aaKnown RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 HCRTR2O43614 444 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 CTAG2O75638 210 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 TMIGD3P0DMS9 266 aaPredicted RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 LAMP1P11279 417 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 KIR2DL3P43628 341 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 TPD52P55327 224 aaPredicted RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 WDR4P57081 412 aaKnown RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 LRRC74AQ0VAA2 488 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 GRAMD1BQ3KR37 738 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 FLYWCH1Q4VC44 716 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 EXOSC6Q5RKV6 272 aaKnown RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 AAGABQ6PD74 315 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 ZAR1Q86SH2 424 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 GCNT2Q8N0V5 402 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 OR7A2PQ8NGA2 310 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 OR5M1Q8NGP8 315 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 NUDT8Q8WV74 236 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 DYDC1Q8WWB3 177 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 OTUB1Q96FW1 271 aaPredicted RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 RMND5BQ96G75 393 aaPredicted RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 ATP6V1G3Q96LB4 118 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 UCN2Q96RP3 112 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 SORT1Q99523 831 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 ZBTB18Q99592 522 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 TBL1XR1Q9BZK7 514 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 ZCCHC3Q9NUD5 404 aaKnown RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 GIN1Q9NXP7 522 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 NUP214P35658 2090 aaPredicted RBP14.43□□□□□ -0.1
LMX1B-204ENST00000561065 HMGB1P1B2RPK0 211 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-204ENST00000561065 LINC01387J3KSC0 135 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 NKX2-2O95096 273 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 UTS2O95399 124 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 TGM6O95932 706 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 IL18BPO95998 194 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 CHMP24386 653 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 DGKQP52824 942 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 DIO3P55073 304 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 DSCR4P56555 118 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-204ENST00000561065 C17orf67Q0P5P2 114 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 CAMKMTQ7Z624 323 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 MARCH3Q86UD3 253 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 RIMKLAQ8IXN7 391 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 COX18Q8N8Q8 333 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 PSMA8Q8TAA3 256 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 SFXN5Q8TD22 340 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 ADAMTS15Q8TE58 950 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 ZBTB9Q96C00 473 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 LRRC46Q96FV0 321 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 PPP1R36Q96LQ0 422 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 STACQ99469 402 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 KLHDC3Q9BQ90 382 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 HOXD1Q9GZZ0 328 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 SLC24A3Q9HC58 644 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 PNPOQ9NVS9 261 aa14.42□□□□□ -0.1
LMX1B-204ENST00000561065 PRSS51A0A1B0GVH4 220 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 RNASET2O00584 256 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 SNNO75324 88 aaPredicted RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 RCBTB2O95199 551 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 AGR2O95994 175 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 ATP6V1C1P21283 382 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 DNAJA1P31689 397 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 OPRM1P35372 400 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 GANABQ14697 944 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 DUSP5Q16690 384 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 RAET1LQ5VY80 246 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 OGFOD2Q6N063 350 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 MFSD12Q6NUT3 480 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 UBQLNLQ8IYU4 475 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 SLC16A11Q8NCK7 471 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 OR8J2Q8NGG1 315 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 GOT1L1Q8NHS2 421 aaPredicted RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 PIWIL2Q8TC59 973 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 LRRC8CQ8TDW0 803 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 JADE3Q92613 823 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 WNT2BQ93097 391 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 INTS12Q96CB8 462 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 C1GALT1C1Q96EU7 318 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 BTBD2Q9BX70 525 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 ACTRT3Q9BYD9 372 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 C20orf27Q9GZN8 174 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 LIME1Q9H400 295 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 ZNF395Q9H8N7 513 aaPredicted RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 DUSP22Q9NRW4 184 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 FBXO34Q9NWN3 711 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 DNAJB12Q9NXW2 375 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 PRRC2AP48634 2157 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 IGLV3-32A0A0A0MS00 114 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 OR2M5A3KFT3 312 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 SHISA8B8ZZ34 492 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 H3BNH8 94 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 GMFGO60234 142 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 TNFSF13O75888 250 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 HK1P19367 917 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 S100A3P33764 101 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 SUCLG1P53597 346 aaKnown RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 POU6F2P78424 691 aaPredicted RBP14.41□□□□□ -0.1
LMX1B-204ENST00000561065 NXNQ6DKJ4 435 aa14.41□□□□□ -0.1
LMX1B-204ENST00000561065 SPNS3Q6ZMD2 512 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms