RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GALNT18Q6P9A2 607 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 APOOLQ6UXV4 268 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 TFAP2EQ6VUC0 442 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 OR2L13Q8N349 312 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 C16orf78Q8WTQ4 265 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 OSTF1Q92882 214 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 ADAD1Q96M93 576 aaKnown RBP16.49■□□□□ 0.23
TPM1-226ENST00000560959 BBS4Q96RK4 519 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 LMF2Q9BU23 707 aaKnown RBP16.49■□□□□ 0.23
TPM1-226ENST00000560959 POTEKPQ9BYX7 375 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 VPS11Q9H270 941 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 C12orf49Q9H741 205 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 C3orf14Q9HBI5 128 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 TAS2R7Q9NYW3 318 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 ZNF225Q9UK10 706 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 GRID1Q9ULK0 1009 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 VDAC3Q9Y277 283 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 PCNX3Q9H6A9 2034 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 SVEP1Q4LDE5 3571 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 A0A0J9YW62 118 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 GNG14A0A1W2PPG7 69 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 ALG1L2C9J202 215 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 UPK1AO00322 258 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 PPP6CO00743 305 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 TNFSF11O14788 317 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 SSX4O60224 188 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 KRT6AP02538 564 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 KRT6BP04259 564 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 NGFRP08138 427 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 IFI6P09912 130 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 ME2P23368 584 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 KRT6CP48668 564 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 CARD18P57730 90 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 ITGADQ13349 1161 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 SPIN4Q56A73 249 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 AGAP6Q5VW22 663 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 SEZ6L2Q6UXD5 910 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
TPM1-226ENST00000560959 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 RNF128Q8TEB7 428 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 KISS1RQ969F8 398 aaPredicted RBP16.48■□□□□ 0.23
TPM1-226ENST00000560959 C19orf24Q9BVV8 132 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 TIGARQ9NQ88 270 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 SIRT5Q9NXA8 310 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 B3GALT5Q9Y2C3 310 aa16.48■□□□□ 0.23
TPM1-226ENST00000560959 FAM234BA2RU67 622 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 HAX1O00165 279 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 MANBAO00462 879 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 COL6A2P12110 1019 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 SLC25A16P16260 332 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 DDCP20711 480 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 NUDT6P53370 316 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 CYB5R2Q6BCY4 276 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 CLEC2AQ6UVW9 174 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 TRABD2AQ86V40 505 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 TDRPQ86YL5 185 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 REXO5Q96IC2 774 aaKnown RBP16.47■□□□□ 0.23
TPM1-226ENST00000560959 RADILQ96JH8 1075 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 SHARPINQ9H0F6 387 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 KLHL13Q9P2N7 655 aa16.47■□□□□ 0.23
TPM1-226ENST00000560959 DMGDHQ9UI17 866 aaKnown RBP16.47■□□□□ 0.23
TPM1-226ENST00000560959 A0A1W2PRB8 838 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 SHISA9B4DS77 424 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 NDUFB5O43674 189 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 ULK1O75385 1050 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 OR4F21O95013 312 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 KCNH1O95259 989 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 ADAP00813 363 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 HSD17B3P37058 310 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 MAGEA12P43365 314 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 NCBP2P52298 156 aaKnown RBP eCLIP16.46■□□□□ 0.23
TPM1-226ENST00000560959 PLTPP55058 493 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 CASP9P55211 416 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 CDH13P55290 713 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 MRPS25P82663 173 aaKnown RBP16.46■□□□□ 0.23
TPM1-226ENST00000560959 ACSM2AQ08AH3 577 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 RASA2Q15283 850 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 PLPPR5Q32ZL2 321 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 GRAMD1BQ3KR37 738 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 ACSM2BQ68CK6 577 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 RPS27LQ71UM5 84 aaKnown RBP16.46■□□□□ 0.23
TPM1-226ENST00000560959 CCDC25Q86WR0 208 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 FBXO25Q8TCJ0 367 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 CPNE4Q96A23 557 aaPredicted RBP16.46■□□□□ 0.23
TPM1-226ENST00000560959 MRPL57Q9BQC6 102 aaKnown RBP16.46■□□□□ 0.23
TPM1-226ENST00000560959 MED17Q9NVC6 651 aa16.46■□□□□ 0.23
TPM1-226ENST00000560959 DDX18Q9NVP1 670 aaKnown RBP16.46■□□□□ 0.23
TPM1-226ENST00000560959 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 GOLGA8RI6L899 631 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 JUNP05412 331 aaKnown RBP16.45■□□□□ 0.22
TPM1-226ENST00000560959 TIA1P31483 386 aaKnown RBP eCLIP16.45■□□□□ 0.22
TPM1-226ENST00000560959 TSC22D1Q15714 1073 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 ZNF239Q16600 458 aaKnown RBP16.45■□□□□ 0.22
TPM1-226ENST00000560959 TMEM107Q6UX40 140 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 NUFIP2Q7Z417 695 aaKnown RBP16.45■□□□□ 0.22
TPM1-226ENST00000560959 ATG4DQ86TL0 474 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms