RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 FASNP49327 2511 aaKnown RBP5.05□□□□□ -1.6
VPS13C-209ENST00000560637 TRAV27A0A087WT01 109 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 A0A0A6YYD5 115 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 AQP12BA6NM10 295 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 PSMD9O00233 223 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 RPP14O95059 124 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 KCNK5O95279 499 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 UTS2O95399 124 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 F13BP05160 661 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 GYPBP06028 91 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 TPOP07202 933 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 UBL4AP11441 157 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 PRG2P13727 222 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 GSTM2P28161 218 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CYB561P49447 251 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SSR4P51571 173 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 AGFG1P52594 562 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CXADRP78310 365 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SIRPAP78324 504 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 VLDLRP98155 873 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CFHR1Q03591 330 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 PIGFQ07326 219 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 PMS2P3Q13401 168 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR7A5Q15622 319 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ANKRD34AQ69YU3 496 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SERPINA11Q86U17 422 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 AQP12AQ8IXF9 295 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CLIP4Q8N3C7 705 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ZCCHC7Q8N3Z6 543 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 DNAJC22Q8N4W6 341 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 DPP10Q8N608 796 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 TCEANCQ8N8B7 351 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR10H4Q8NGA5 316 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR10H5Q8NGA6 315 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR6T1Q8NGN1 323 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 BBS10Q8TAM1 723 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SLC39A7Q92504 469 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NSMAFQ92636 917 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF501Q96CX3 271 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 GNRHR2Q96P88 292 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR51B6Q9H340 312 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 TPK1Q9H3S4 243 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NANSQ9NR45 359 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ACSS1Q9NUB1 689 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 GPR83Q9NYM4 423 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 RIMS3Q9UJD0 308 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NPFFR2Q9Y5X5 522 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 A0A1W2PNR3 127 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SMIM30A4D0T7 59 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF726A6NNF4 738 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 C17orf51A8MQB3 221 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NPIPA5E9PKD4 350 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 H7C1C5 153 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ZNHIT1O43257 154 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ARHGEF9O43307 516 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ICMTO60725 284 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ICOSLGO75144 302 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 FADS2O95864 444 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 GGT1P19440 569 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NAA10P41227 235 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 RPS5P46782 204 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 LCN6P62502 163 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CBLBQ13191 982 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 COL19A1Q14993 1142 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 BROXQ5VW32 411 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 DLEU7Q6UYE1 221 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 DGAT2L6Q6ZPD8 337 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 HIPK1Q86Z02 1210 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 GALNT15Q8N3T1 639 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 D2HGDHQ8N465 521 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 LINC00471Q8N535 108 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR4K13Q8NH42 304 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR14A16Q8NHC5 309 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 FAM122AQ96E09 287 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 C19orf43Q9BQ61 176 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 OR11A1Q9GZK7 315 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NDEL1Q9GZM8 345 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SYNPO2LQ9H987 977 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 SMPD3Q9NY59 655 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 TAS2R10Q9NYW0 307 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ADAM29Q9UKF5 820 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NPIPA1Q9UND3 350 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 PCDHGA10Q9Y5H3 936 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 FAM183AA6NL82 134 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 VSTM2BA6NLU5 285 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NPIPA2E9PIF3 369 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 NPIPA3F8WFD2 350 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 FXYD1O00168 92 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 PCDH17O14917 1159 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 MYL12BO14950 172 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 RGS5O15539 181 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CNOT3O75175 753 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 WISP3O95389 354 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 MED26O95402 600 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 ANGPTL1O95841 491 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 IGLV3-19P01714 112 aa5.04□□□□□ -1.6
VPS13C-209ENST00000560637 DBIP07108 87 aaKnown RBP5.04□□□□□ -1.6
VPS13C-209ENST00000560637 CHRM4P08173 479 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms