RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 BCL2L10Q9HD36 194 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PRPF19Q9UMS4 504 aaKnown RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 M0QX08 132 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 NDUFB5O43674 189 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 PEX1O43933 1283 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 KIAA0513O60268 411 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 FADS1O60427 444 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 DBIP07108 87 aaKnown RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 GUSBP08236 651 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 ETS2P15036 469 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 MASP1P48740 699 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 SNTA1Q13424 505 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 CEACAM7Q14002 265 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 VEZF1Q14119 521 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF169Q14929 603 aaPredicted RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 SPATS1Q496A3 300 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 TBCELQ5QJ74 424 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 PCSK4Q6UW60 755 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 GALNTL5Q7Z4T8 443 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 PATL1Q86TB9 770 aaKnown RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 RBMXL3Q8N7X1 1067 aaKnown RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 TEX19Q8NA77 164 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 GATSQ8NAP1 163 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 POGLUT1Q8NBL1 392 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 OR52P1PQ8NH57 321 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 PHOSPHO1Q8TCT1 267 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 OSBPL11Q9BXB4 747 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 ANGPTL4Q9BY76 406 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 SLC25A18Q9H1K4 315 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 EGFL7Q9UHF1 273 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 CNOT11Q9UKZ1 510 aaKnown RBP13.14□□□□□ -0.31
SMAD6-204ENST00000559931 B3GNT3Q9Y2A9 372 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 DTNAQ9Y4J8 743 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 PCDHGA10Q9Y5H3 936 aa13.14□□□□□ -0.31
SMAD6-204ENST00000559931 ANKRD33BA6NCL7 494 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 AGAP5A6NIR3 686 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 CXCR6O00574 342 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 GSC2O15499 205 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 NME2P1O60361 137 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 UGT2B17O75795 530 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 CYP7B1O75881 506 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 PDE5AO76074 875 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 SNX4O95219 450 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 STAMBPO95630 424 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ANGPTL1O95841 491 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 IFNA14P01570 189 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 NGFRP08138 427 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 HSD17B1P14061 328 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 NCK1P16333 377 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 NME2P22392 152 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ME2P23368 584 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 HTR1EP28566 365 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 NCALDP61601 193 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 PLGLB1Q02325 96 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF141Q15928 474 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 MAPK14Q16539 360 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ZSCAN26Q16670 478 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
SMAD6-204ENST00000559931 KLHL26Q53HC5 615 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 OR5M10Q6IEU7 315 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 Q6ZS92 163 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ARMC8Q8IUR7 673 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 FAM98AQ8NCA5 519 aaKnown RBP13.13□□□□□ -0.31
SMAD6-204ENST00000559931 DUSP19Q8WTR2 217 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 WDR60Q8WVS4 1066 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 FAM162AQ96A26 154 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 FAM173AQ9BQD7 235 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 ARMC7Q9H6L4 198 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 SH2D2AQ9NP31 389 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 LUZP4Q9P127 313 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 PPP4R1LQ9P1A2 415 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 SUCOQ9UBS9 1254 aaKnown RBP13.13□□□□□ -0.31
SMAD6-204ENST00000559931 SEC14L3Q9UDX4 400 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 CD300AQ9UGN4 299 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 SLC13A4Q9UKG4 626 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 IFT52Q9Y366 437 aa13.13□□□□□ -0.31
SMAD6-204ENST00000559931 TLN1Q9Y490 2541 aaKnown RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 SERINC4A6NH21 518 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 ALG1L2C9J202 215 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 NPIPB9F8W1W9 429 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 GNB5O14775 395 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 GMFGO60234 142 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 CSTAP01040 98 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 MEOX1P50221 254 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 C17orf67Q0P5P2 114 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 NADK2Q4G0N4 442 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms