RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RSL1D1O76021 490 aaKnown RBP11.72□□□□□ -0.53
TPM1-220ENST00000559556 OXSR1O95747 527 aaPredicted RBP11.72□□□□□ -0.53
TPM1-220ENST00000559556 PSMA4P25789 261 aaKnown RBP11.72□□□□□ -0.53
TPM1-220ENST00000559556 GABRA3P34903 492 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 SLC6A8P48029 635 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 RFX3P48380 749 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 CTBP2P56545 445 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 NAA20P61599 178 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 NOXRED1Q6NXP6 359 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 FRMD7Q6ZUT3 714 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 SH2D5Q6ZV89 423 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 OR10D3Q8NH80 312 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 PIK3R3Q92569 461 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 SLC9A6Q92581 669 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 CCDC126Q96EE4 140 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 METTL2AQ96IZ6 378 aaKnown RBP11.72□□□□□ -0.53
TPM1-220ENST00000559556 MDFIQ99750 246 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 OR10A4Q9H209 315 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 GLRX2Q9NS18 164 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 EMCNQ9ULC0 261 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 MCTS1Q9ULC4 181 aaKnown RBP11.72□□□□□ -0.53
TPM1-220ENST00000559556 SVEP1Q4LDE5 3571 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 GOLGA8RI6L899 631 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 HS3ST1O14792 307 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 ADAMDEC1O15204 470 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 PDPK1O15530 556 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 GMFGO60234 142 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 URI1O94763 535 aaPredicted RBP11.71□□□□□ -0.53
TPM1-220ENST00000559556 NKX2-2O95096 273 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 PLGP00747 810 aaPredicted RBP11.71□□□□□ -0.53
TPM1-220ENST00000559556 PLAUP00749 431 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.53
TPM1-220ENST00000559556 PRPH2P23942 346 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 PPP2R2BQ00005 443 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 HSPB3Q12988 150 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 SLC29A2Q14542 456 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 PLPPR5Q32ZL2 321 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 VPS26BQ4G0F5 336 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
TPM1-220ENST00000559556 PPP4R4Q6NUP7 873 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 BEND4Q6ZU67 534 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 ZNF551Q7Z340 670 aaPredicted RBP11.71□□□□□ -0.53
TPM1-220ENST00000559556 WDR75Q8IWA0 830 aaKnown RBP11.71□□□□□ -0.53
TPM1-220ENST00000559556 CNPY4Q8N129 248 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 CCNYL1Q8N7R7 359 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 ZNF611Q8N823 705 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 ACTRT2Q8TDY3 377 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 MZB1Q8WU39 189 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 EGLN2Q96KS0 407 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 NPAS1Q99742 590 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 FANCFQ9NPI8 374 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 EQTNQ9NQ60 294 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 NTMQ9P121 344 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 CLEC4AQ9UMR7 237 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
TPM1-220ENST00000559556 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 NPIPB8E9PQR5 432 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 G3V2L1 256 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 RIPK2O43353 540 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 NDUFB5O43674 189 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 TBX19O60806 448 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 SOX30O94993 753 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 PYGBP11216 843 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 PRPS2P11908 318 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 NID1P14543 1247 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 AGTR1P30556 359 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 FRKP42685 505 aaPredicted RBP11.7□□□□□ -0.54
TPM1-220ENST00000559556 RAC1P63000 192 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 SLC18A2Q05940 514 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 KRTAP1-1Q07627 177 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 CAPRIN1Q14444 709 aaKnown RBP11.7□□□□□ -0.54
TPM1-220ENST00000559556 KIAA0040Q15053 153 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 ZYG11AQ6WRX3 759 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
TPM1-220ENST00000559556 GALNT10Q86SR1 603 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 STK32CQ86UX6 486 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 EXOC3L1Q86VI1 746 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 CDRT4Q8N9R6 151 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 OR4C3Q8NH37 302 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 OR2V1Q8NHB1 315 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 FAM110BQ8TC76 370 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 GPR151Q8TDV0 419 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 GIMAP5Q96F15 307 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 PLPPR2Q96GM1 343 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 FCRL1Q96LA6 429 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 C16orf45Q96MC5 204 aaPredicted RBP11.7□□□□□ -0.54
TPM1-220ENST00000559556 RNF145Q96MT1 663 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 MS4A4EQ96PG1 132 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 ACTR6Q9GZN1 396 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 RRAGDQ9NQL2 400 aaPredicted RBP11.7□□□□□ -0.54
TPM1-220ENST00000559556 PSMC3IPQ9P2W1 217 aaPredicted RBP11.7□□□□□ -0.54
TPM1-220ENST00000559556 DCDC2Q9UHG0 476 aa11.7□□□□□ -0.54
TPM1-220ENST00000559556 ADAM21Q9UKJ8 722 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms