RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 OPN1MW3P0DN78 364 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 NT5EP21589 574 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 CDH5P33151 784 aaPredicted RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 CA8P35219 290 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 ACVR1BP36896 505 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 MAGEA5P43359 124 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 POU3F4P49335 361 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 AP3M2P53677 418 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 PLA2G16P53816 162 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 PJVKQ0ZLH3 352 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 SLC10A1Q14973 349 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 TTC23Q5W5X9 447 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 ZNF772Q68DY9 489 aaPredicted RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 FAHD2BQ6P2I3 314 aaPredicted RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 APTXQ7Z2E3 356 aaKnown RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 HIPK1Q86Z02 1210 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 OR10A7Q8NGE5 316 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 CTNNBL1Q8WYA6 563 aaPredicted RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 FAHD2AQ96GK7 314 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 TUBGCP2Q9BSJ2 902 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 PUS3Q9BZE2 481 aaKnown RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 CRNKL1Q9BZJ0 848 aaKnown RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 ELOVL4Q9GZR5 314 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 STYXL1Q9Y6J8 313 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 PCP4L1A6NKN8 68 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ERI2A8K979 691 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 B4DXG7 233 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 STX7O15400 261 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 PI15O43692 258 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 OR1F1O43749 312 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 N4BP1O75113 896 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 RHBDL1O75783 438 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 CD55P08174 381 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 IQCF3P0C7M6 154 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 DBTP11182 482 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 PGCP20142 388 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 TPSB2P20231 275 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 SHC1P29353 583 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 NF2P35240 595 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 OR1D4P47884 311 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ALDH3B2P48448 385 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 RGS4P49798 205 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 NOVA1P51513 510 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 EFNA3P52797 238 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ARFIP1P53367 373 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ACTR1AP61163 376 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 OTUD4Q01804 1114 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 GANABQ14697 944 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 TPSAB1Q15661 275 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 UNC5CLQ8IV45 518 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 SPEM1Q8N4L4 309 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 DHRSXQ8N5I4 330 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 STXBP6Q8NFX7 210 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 OR6T1Q8NGN1 323 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ZNF671Q8TAW3 534 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 AGAP11Q8TF27 550 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ZNF606Q8WXB4 792 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 OSTF1Q92882 214 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 SH3YL1Q96HL8 342 aaPredicted RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 MCCC1Q96RQ3 725 aaPredicted RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 RIT2Q99578 217 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 CCT7Q99832 543 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 APOL2Q9BQE5 337 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 TMEM121Q9BTD3 319 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ZSCAN5AQ9BUG6 496 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 GLT8D2Q9H1C3 349 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 UTP6Q9NYH9 597 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 GNG12Q9UBI6 72 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 PRODH2Q9UF12 536 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 SAMD4AQ9UPU9 718 aaKnown RBP3.46□□□□□ -1.86
CASC4-206ENST00000558847 SLCO1B1Q9Y6L6 691 aa3.46□□□□□ -1.86
CASC4-206ENST00000558847 ATP10DQ9P241 1426 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 TRAV9-2A0A087WT02 112 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ZSCAN5CA6NGD5 496 aaPredicted RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 FAM220BPB1ANY3 271 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 MSH4O15457 936 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 MTX2O75431 263 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 UGT2B17O75795 530 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 IGF1P05019 195 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 XRCC1P18887 633 aaPredicted RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 NMT1P30419 496 aaKnown RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 SSR1P43307 286 aaKnown RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 MAGEA9P43362 315 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 XCR1P46094 333 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 TAF6P49848 677 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 HMGN5P82970 282 aaKnown RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 CNTN2Q02246 1040 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ZFP36L1Q07352 338 aaKnown RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 NCBP1Q09161 790 aaKnown RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 COX10Q12887 443 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 CHIT1Q13231 466 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 CHI3L2Q15782 390 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 EXOC3L2Q2M3D2 409 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 CCDC152Q4G0S7 254 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 PVRIGQ6DKI7 326 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms