RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 TGM7Q96PF1 710 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 WDR12Q9GZL7 423 aaKnown RBP9.87□□□□□ -0.83
CUX1-217ENST00000558836 TWSG1Q9GZX9 223 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 SEMA6CQ9H3T2 930 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 MED20Q9H944 212 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 CACYBPQ9HB71 228 aaKnown RBP9.87□□□□□ -0.83
CUX1-217ENST00000558836 TOR4AQ9NXH8 423 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 NTMQ9P121 344 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 POMT2Q9UKY4 750 aa9.87□□□□□ -0.83
CUX1-217ENST00000558836 HEATR5AQ86XA9 2040 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 CBX7O95931 251 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 SCG5P05408 212 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 RPS19P39019 145 aaKnown RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 EFNB1P98172 346 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PLAURQ03405 335 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 CD300CQ08708 224 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 STX4Q12846 297 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 OR1Q1Q15612 314 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 OCLNQ16625 522 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PDZK1Q5T2W1 519 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 SAMD14Q8IZD0 417 aaPredicted RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 ZNF619Q8N2I2 560 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 VWA5B2Q8N398 1253 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 FAM83FQ8NEG4 500 aaPredicted RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 CHPT1Q8WUD6 406 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 TAPBPLQ9BX59 468 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 ZNF350Q9GZX5 532 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 SNTG1Q9NSN8 517 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 TMEM184BQ9Y519 407 aaPredicted RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 SPIN1Q9Y657 262 aaPredicted RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 OR5K4A6NMS3 321 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PLD2O14939 933 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PLOD3O60568 738 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PIPP12273 146 aaPredicted RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 MAKP20794 623 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 GSTM3P21266 225 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 CCR5P51681 352 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 NDUFA9Q16795 377 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 NDUFAF6Q330K2 333 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PRAMEF17Q5VTA0 474 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 SYT13Q7L8C5 426 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 CDRT4Q8N9R6 151 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 TMEM163Q8TC26 289 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 SMAP2Q8WU79 429 aaPredicted RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 S100ZQ8WXG8 99 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 TM9SF4Q92544 642 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 CNOT9Q92600 299 aaKnown RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 RBM18Q96H35 190 aaKnown RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 SPACA7Q96KW9 195 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 SLC38A3Q99624 504 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 TM9SF2Q99805 663 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 PRSS27Q9BQR3 290 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 MND1Q9BWT6 205 aa9.86□□□□□ -0.83
CUX1-217ENST00000558836 TESQ9UGI8 421 aaKnown RBP9.86□□□□□ -0.83
CUX1-217ENST00000558836 FREM2Q5SZK8 3169 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 ARID1BQ8NFD5 2236 aaPredicted RBP9.85□□□□□ -0.83
CUX1-217ENST00000558836 FUOMA2VDF0 154 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 IGKV1D-16P01601 117 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 IFNGR2P38484 337 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 MTNR1AP48039 350 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 LIMK1P53667 647 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 TUBA1BP68363 451 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 PSG6Q00889 435 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 ZNF267Q14586 743 aaPredicted RBP9.85□□□□□ -0.83
CUX1-217ENST00000558836 LRIT3Q3SXY7 679 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 RASSF6Q6ZTQ3 369 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 MBOAT2Q6ZWT7 520 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 TUBA1AQ71U36 451 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 KBTBD8Q8NFY9 601 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 OR9Q1Q8NGQ5 310 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 OR51A7Q8NH64 312 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 FGF11Q92914 225 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 MMABQ96EY8 250 aaPredicted RBP9.85□□□□□ -0.83
CUX1-217ENST00000558836 ART5Q96L15 291 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 ASPNQ9BXN1 380 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 RACGAP1Q9H0H5 632 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 TMEM165Q9HC07 324 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 UCKL1Q9NWZ5 548 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 SOHLH2Q9NX45 425 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 KLK4Q9Y5K2 254 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 CDHR4A6H8M9 788 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 SOCS6O14544 535 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 RGS5O15539 181 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 FOXS1O43638 330 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 KCNK2O95069 426 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 RAB36O95755 333 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 IFI30P13284 250 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 NID1P14543 1247 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 UGT2B10P36537 528 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 ATP6V1E1P36543 226 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 CRYBB2P43320 205 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 GCGRP47871 477 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 EMDP50402 254 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 BLKP51451 505 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 GAS1P54826 345 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 CDH11P55287 796 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 RHAGQ02094 409 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 FAM53BQ14153 422 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 INSL4Q14641 139 aa9.85□□□□□ -0.83
CUX1-217ENST00000558836 DECR1Q16698 335 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms