RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TSPYL5Q86VY4 417 aaPredicted RBP13.2□□□□□ -0.3
SPG11-210ENST00000558319 PARP16Q8N5Y8 322 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 ZNF439Q8NDP4 499 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 GLYATL1Q969I3 302 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 ALG8Q9BVK2 526 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 MAGIXQ9H6Y5 334 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 GLTPQ9NZD2 209 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 A6NHS1 94 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 NDUFA6P56556 154 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 PSPHP78330 225 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 SPCS2Q15005 226 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 CYB561A3Q8NBI2 242 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 ST8SIA2Q92186 375 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 GPRC5BQ9NZH0 403 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 SIX4Q9UIU6 781 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
SPG11-210ENST00000558319 OARD1Q9Y530 152 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 CAMTA1Q9Y6Y1 1673 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 DHCR24Q15392 516 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 C18orf63Q68DL7 685 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 SGTBQ96EQ0 304 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 TSPAN10Q9H1Z9 355 aaPredicted RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 MRPL22Q9NWU5 206 aaKnown RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 USP36Q9P275 1121 aaKnown RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 KLHL21Q9UJP4 597 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 SHMT2P34897 504 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 CDKN3Q16667 212 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 RTP2Q5QGT7 225 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 LIPJQ5W064 366 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 OR4C11Q6IEV9 310 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 OR52B6Q8NGF0 335 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 BSCL2Q96G97 398 aaPredicted RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 NMNAT1Q9HAN9 279 aaPredicted RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 CSNK1G3Q9Y6M4 447 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 FAM230AA0A1W2PPH8 454 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 SORDQ00796 357 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 TLE1Q04724 770 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPG11-210ENST00000558319 BATF2Q8N1L9 274 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 CNOT11Q9UKZ1 510 aaKnown RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 GSRP00390 522 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 TIA1P31483 386 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPG11-210ENST00000558319 UNQ6126/PRO20091Q6UXV3 157 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 SGPP2Q8IWX5 399 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 NRMQ8IXM6 262 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 SLC35F2Q8IXU6 374 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 IL17RCQ8NAC3 791 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 ANKK1Q8NFD2 765 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 HUS1BQ8NHY5 278 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 ZMYND19Q96E35 227 aaPredicted RBP13.19□□□□□ -0.3
SPG11-210ENST00000558319 MRGPRX2Q96LB1 330 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 TOR1AO14656 332 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 STK17BO94768 372 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 GABRR1P24046 479 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 YIF1BQ5BJH7 314 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 KCNJ9Q92806 393 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 ZNF778Q96MU6 729 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
SPG11-210ENST00000558319 G3V3Y1 287 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 MPIG6BO95866 241 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 EPHA4P54764 986 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 GALNT2Q10471 571 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 CST6Q15828 149 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 TATDN3Q17R31 274 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 TMPRSS7Q7RTY8 843 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SYT3Q9BQG1 590 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 DPH1Q9BZG8 443 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 A0A1W2PQ09 198 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 IL13RA1P78552 427 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 MALLQ13021 153 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 CDCA2Q69YH5 1023 aaPredicted RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 OR5AR1Q8NGP9 310 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 TP53I11O14683 189 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 HOXB5P09067 269 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 PNMTP11086 282 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 DNAJB1P25685 340 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 GSTM4Q03013 218 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 GPR17Q13304 367 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 GTDC1Q4AE62 458 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 AGAP7PQ5VUJ5 663 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 AGAP6Q5VW22 663 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 OR52W1Q6IF63 320 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SLC18B1Q6NT16 456 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 ARHGAP11AQ6P4F7 1023 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 LRRC25Q8N386 305 aaPredicted RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 B3GNT7Q8NFL0 401 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 STEAP2Q8NFT2 490 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 FAM3CQ92520 227 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 AGAP4Q96P64 663 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 LMAN1LQ9HAT1 526 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 NOX3Q9HBY0 568 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms