RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 OR4F15Q8NGB8 312 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 TMEM163Q8TC26 289 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 GATAD2BQ8WXI9 593 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 MMABQ96EY8 250 aaPredicted RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 HSPA12BQ96MM6 686 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 DACH2Q96NX9 599 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 PRSS27Q9BQR3 290 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 WDR12Q9GZL7 423 aaKnown RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 TOR4AQ9NXH8 423 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 QPCTLQ9NXS2 382 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 CAB39Q9Y376 341 aaPredicted RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 PCDH15Q96QU1 1955 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 STK25O00506 426 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 KCNK2O95069 426 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 AGR2O95994 175 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 CSF2P04141 144 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 NID1P14543 1247 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 MAKP20794 623 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 IFNGR2P38484 337 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 CSNK1EP49674 416 aaKnown RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 SEPHS1P49903 392 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 PSG6Q00889 435 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 CSTF1Q05048 431 aaKnown RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 MADCAM1Q13477 382 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FAM53BQ14153 422 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 DECR1Q16698 335 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SLC36A4Q6YBV0 504 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RASSF6Q6ZTQ3 369 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 MBOAT2Q6ZWT7 520 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RANBP3LQ86VV4 465 aaPredicted RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 LINC00471Q8N535 108 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 AMER2Q8N7J2 671 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 NANOGP1Q8N7R0 232 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FGF11Q92914 225 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 YIPF2Q9BWQ6 316 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 MND1Q9BWT6 205 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 TAPBPLQ9BX59 468 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FBXO8Q9NRD0 319 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 ABCB10Q9NRK6 738 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 KLK4Q9Y5K2 254 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 ASXL3Q9C0F0 2248 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 CDHR4A6H8M9 788 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SOCS6O14544 535 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 OR5F1O95221 314 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RAB36O95755 333 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SCG5P05408 212 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 IFI30P13284 250 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 MLLT3P42568 568 aaPredicted RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 CAPZBP47756 277 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 GCGRP47871 477 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 EFNB1P98172 346 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FZD5Q13467 585 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 NCF4Q15080 339 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 TRIM16LQ309B1 348 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 MEDAGQ5VYS4 303 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 ZNF620Q6ZNG0 422 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 ARHGEF39Q8N4T4 335 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 POGLUT1Q8NBL1 392 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 PSD4Q8NDX1 1056 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 KBTBD8Q8NFY9 601 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RIT1Q92963 219 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 COX4I2Q96KJ9 171 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SLC38A2Q96QD8 506 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 LMF1Q96S06 567 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SPRTNQ9H040 489 aaPredicted RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 DUSP22Q9NRW4 184 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FAIMQ9NVQ4 179 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SPIN1Q9Y657 262 aaPredicted RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 A0A087WV62 115 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 TBX1O43435 398 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 BRINP1O60477 761 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RFPL3O75679 317 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 IFNA16P05015 189 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 DBIP07108 87 aaKnown RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
TPM1-210ENST00000558264 ZGLP1P0C6A0 271 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FPR3P25089 353 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 GTF2E2P29084 291 aaKnown RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 UGT2B10P36537 528 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 MTNR1AP48039 350 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 GAS1P54826 345 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 CDH11P55287 796 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RHAGQ02094 409 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 ELOCQ15369 112 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 EIPR1Q53HC9 387 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 OR9Q1Q8NGQ5 310 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 OR13C2Q8NGS9 318 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 TM9SF4Q92544 642 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 CTHRC1Q96CG8 243 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 RBM18Q96H35 190 aaKnown RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 RACGAP1Q9H0H5 632 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 FOLH1BQ9HBA9 442 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 SNTG1Q9NSN8 517 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 TESQ9UGI8 421 aaKnown RBP9.79□□□□□ -0.84
TPM1-210ENST00000558264 ERVK-19Q9WJR5 959 aa9.79□□□□□ -0.84
TPM1-210ENST00000558264 TRAV27A0A087WT01 109 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms