RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
USP3-205ENST00000557884 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
USP3-205ENST00000557884 HOXD1Q9GZZ0 328 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 RAD21L1Q9H4I0 556 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 IKZF5Q9H5V7 419 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 SDHAF3Q9NRP4 125 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 SH3BGRL2Q9UJC5 107 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 DKKL1Q9UK85 242 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 WDR45Q9Y484 360 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 NUP214P35658 2090 aaPredicted RBP13.06□□□□□ -0.32
USP3-205ENST00000557884 MRASO14807 208 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 KIAA0513O60268 411 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 SLC19A2O60779 497 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 TNFRSF21O75509 655 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 CBR3O75828 277 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 IGHG3P01860 377 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 ABOP16442 354 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 MTPNP58546 118 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 TXNL4AP83876 142 aaKnown RBP13.05□□□□□ -0.32
USP3-205ENST00000557884 CYLC2Q14093 348 aaPredicted RBP13.05□□□□□ -0.32
USP3-205ENST00000557884 SELPLGQ14242 412 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 MAPK14Q16539 360 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 NDUFAF6Q330K2 333 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 KLHL26Q53HC5 615 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 WIPI1Q5MNZ9 446 aaPredicted RBP13.05□□□□□ -0.32
USP3-205ENST00000557884 C1QL3Q5VWW1 255 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 ARHGAP11AQ6P4F7 1023 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 PIGWQ7Z7B1 504 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 TREML1Q86YW5 311 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 C10orf111Q8N326 155 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 FADS6Q8N9I5 356 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 FAM83FQ8NEG4 500 aaPredicted RBP13.05□□□□□ -0.32
USP3-205ENST00000557884 PHOSPHO1Q8TCT1 267 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 MAL2Q969L2 176 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 TRNT1Q96Q11 434 aaKnown RBP13.05□□□□□ -0.32
USP3-205ENST00000557884 CCT8L2Q96SF2 557 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 CGREF1Q99674 301 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 SLC39A3Q9BRY0 314 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 QRSL1Q9H0R6 528 aaKnown RBP13.05□□□□□ -0.32
USP3-205ENST00000557884 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 QPCTLQ9NXS2 382 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 SPRR3Q9UBC9 169 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 P2RX2Q9UBL9 471 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 LIPT1Q9Y234 373 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 SLC6A5Q9Y345 797 aa13.05□□□□□ -0.32
USP3-205ENST00000557884 TRGV8A0A0C4DH27 118 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 EVPLLA8MZ36 301 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 NPIPA2E9PIF3 369 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 NPIPA3F8WFD2 350 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 SLC22A2O15244 555 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 OIP5O43482 229 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 HPNP05981 417 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 BCHEP06276 602 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 PPIBP23284 216 aaKnown RBP13.04□□□□□ -0.32
USP3-205ENST00000557884 DPP4P27487 766 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 ADSLP30566 484 aaPredicted RBP13.04□□□□□ -0.32
USP3-205ENST00000557884 PTGS2P35354 604 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 MAGEA8P43361 318 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 KCNC4Q03721 635 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 C17orf67Q0P5P2 114 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 FADDQ13158 208 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 MAPK11Q15759 364 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 C3AR1Q16581 482 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 TRMT5Q32P41 509 aaKnown RBP13.04□□□□□ -0.32
USP3-205ENST00000557884 RUNDC3AQ59EK9 446 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 RPS26P11Q5JNZ5 115 aaPredicted RBP13.04□□□□□ -0.32
USP3-205ENST00000557884 GCNT6Q5T4J0 391 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 LRRC74BQ6ZQY2 392 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 ZNF619Q8N2I2 560 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 OR14L1PQ8NHC6 308 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 ZG16BQ96DA0 208 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 KLHDC3Q9BQ90 382 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 MYLK2Q9H1R3 596 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 SLC38A1Q9H2H9 487 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 RUBCNLQ9H714 662 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 ACKR4Q9NPB9 350 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 TAS2R10Q9NYW0 307 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 ADAM21Q9UKJ8 722 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 RPH3AQ9Y2J0 694 aaPredicted RBP13.04□□□□□ -0.32
USP3-205ENST00000557884 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 DTNAQ9Y4J8 743 aa13.04□□□□□ -0.32
USP3-205ENST00000557884 IGLV3-32A0A0A0MS00 114 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 A0A1W2PQD3 144 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 TMEM247A6NEH6 219 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 SERINC4A6NH21 518 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 BBIP1A8MTZ0 92 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 H3BNH8 94 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 GTPBP1O00178 669 aaKnown RBP13.03□□□□□ -0.32
USP3-205ENST00000557884 HCRTR2O43614 444 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 HCN1O60741 890 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 SHOX2O60902 331 aaPredicted RBP13.03□□□□□ -0.32
USP3-205ENST00000557884 UGT2B17O75795 530 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 TPOP07202 933 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 COX4I1P13073 169 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 ENDOUP21128 410 aaKnown RBP13.03□□□□□ -0.32
USP3-205ENST00000557884 SRD5A2P31213 254 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms