RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ZG16BQ96DA0 208 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 AHCYL2Q96HN2 611 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 SORCS2Q96PQ0 1159 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TBX5Q99593 518 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 UBQLN3Q9H347 655 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 HEXA-AS1Q9H8Q6 139 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 HCFC1R1Q9NWW0 138 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 NTNG1Q9Y2I2 539 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 GSAPA4D1B5 854 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 I3L521 148 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 PGRMC2O15173 223 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 IFNA7P01567 189 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 INHAP05111 366 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 CSNK2A2P19784 350 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 PRKACBP22694 351 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 AHRP35869 848 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ARFIP1P53367 373 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF750Q32MQ0 723 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 C6orf132Q5T0Z8 1188 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 NIPAL3Q6P499 406 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 CEACAM19Q7Z692 300 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ADGRD2Q7Z7M1 963 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TMEM99Q8N816 258 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 NUP43Q8NFH3 380 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TTLQ8NG68 377 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 OR8K5Q8NH50 307 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TMEM255BQ8WV15 326 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ADAMTS14Q8WXS8 1223 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 HSD17B8Q92506 261 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TCEAL4Q96EI5 215 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 CNRIP1Q96F85 164 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ZSWIM3Q96MP5 696 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 MOSPD1Q9UJG1 213 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 CHST2Q9Y4C5 530 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 IRAK3Q9Y616 596 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 WNT6Q9Y6F9 365 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 GOLGA4Q13439 2230 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-211ENST00000557658 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 OR5K3A6NET4 321 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC9B1P1A6NJY1 282 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC9A3R1O14745 358 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 MT-ND5P03915 603 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 C8orf89P0DMQ9 161 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 POLR2CP19387 275 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 CXCL3P19876 107 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 GIFP27352 417 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 EPHA5P54756 1037 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 OR10A3P58181 314 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 GALEQ14376 348 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 TEAD2Q15562 447 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 CDONQ4KMG0 1287 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 GPR139Q6DWJ6 353 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 HDDC2Q7Z4H3 204 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 RAB42Q8N4Z0 105 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 OR10H4Q8NGA5 316 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 ARRDC3Q96B67 414 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 NDC1Q9BTX1 674 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 DPCDQ9BVM2 203 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 CACNG6Q9BXT2 260 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 AICDAQ9GZX7 198 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 FN3KQ9H479 309 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 ERVMER34-1Q9H9K5 563 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 INPP5EQ9NRR6 644 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC23A2Q9UGH3 650 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 A0A1W2PR48 441 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 DDX6P26196 483 aaKnown RBP eCLIP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 PITPNAQ00169 270 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 DUSP2Q05923 314 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 SNTA1Q13424 505 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 FGFBP1Q14512 234 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 POU4F3Q15319 338 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 FAM27D1Q5T7N8 215 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 LILRA6Q6PI73 481 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 SIAH3Q8IW03 269 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 GPALPP1Q8IXQ4 340 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 OR52L1Q8NGH7 329 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 ABHD4Q8TB40 342 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 BRIX1Q8TDN6 353 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 GANCQ8TET4 914 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 DACT3Q96B18 629 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 CCDC120Q96HB5 630 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 TIMP4Q99727 224 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 MENTQ9BUN1 341 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 C1QTNF2Q9BXJ5 285 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 KLHL31Q9H511 634 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 KLHL1Q9NR64 748 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 UCKL1Q9NWZ5 548 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 ATG4BQ9Y4P1 393 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 NUMA1Q14980 2115 aa11.02□□□□□ -0.65
VIPAS39-211ENST00000557658 MEIKINA0A087WXM9 373 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 A0A0G2JK05 382 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 UNC119BA6NIH7 251 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms