RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ZNF225Q9UK10 706 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 C19orf53Q9UNZ5 99 aaPredicted RBP16.3■□□□□ 0.2
ABCD4-228ENST00000557588 B3GALT5Q9Y2C3 310 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 FREM1Q5H8C1 2179 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 A0A0J9YW62 118 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 GNG14A0A1W2PPG7 69 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 FAM234BA2RU67 622 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 DPRXA6NFQ7 191 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 FAM187AA6NFU0 413 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 MYO1GB0I1T2 1018 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 SMIM24O75264 130 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 RBP1P09455 135 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 MAGEA4P43358 317 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 NUDT6P53370 316 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 ZNF239Q16600 458 aaKnown RBP16.29■□□□□ 0.2
ABCD4-228ENST00000557588 GRAMD1BQ3KR37 738 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 TCHHL1Q5QJ38 904 aaPredicted RBP16.29■□□□□ 0.2
ABCD4-228ENST00000557588 HBMQ6B0K9 141 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 CLEC2AQ6UVW9 174 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 TMEM107Q6UX40 140 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 OR2L13Q8N349 312 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 ABHD3Q8WU67 409 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 RNF145Q96MT1 663 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 LMF2Q9BU23 707 aaKnown RBP16.29■□□□□ 0.2
ABCD4-228ENST00000557588 C1QTNF3Q9BXJ4 246 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 VPS11Q9H270 941 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 HHATLQ9HCP6 504 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 CISD1Q9NZ45 108 aaKnown RBP16.29■□□□□ 0.2
ABCD4-228ENST00000557588 PLCE1Q9P212 2302 aa16.29■□□□□ 0.2
ABCD4-228ENST00000557588 SHISA9B4DS77 424 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 UPK1AO00322 258 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 MANBAO00462 879 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 PABPC4LP0CB38 370 aaKnown RBP16.28■□□□□ 0.2
ABCD4-228ENST00000557588 ME2P23368 584 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 TIA1P31483 386 aaKnown RBP eCLIP16.28■□□□□ 0.2
ABCD4-228ENST00000557588 RFX3P48380 749 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 CDH11P55287 796 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 GUCY2DQ02846 1103 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 P2RY6Q15077 328 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 RNPS1Q15287 305 aaKnown RBP16.28■□□□□ 0.2
ABCD4-228ENST00000557588 ZNHIT3Q15649 155 aaPredicted RBP16.28■□□□□ 0.2
ABCD4-228ENST00000557588 PLPPR5Q32ZL2 321 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 SPIN4Q56A73 249 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 TMEM201Q5SNT2 666 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 GALNT18Q6P9A2 607 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 NUFIP2Q7Z417 695 aaKnown RBP16.28■□□□□ 0.2
ABCD4-228ENST00000557588 CCDC25Q86WR0 208 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 C16orf78Q8WTQ4 265 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 ROBO4Q8WZ75 1007 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 BBS4Q96RK4 519 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 SHARPINQ9H0F6 387 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 TMEM185BQ9H7F4 350 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 GP6Q9HCN6 339 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 DDX18Q9NVP1 670 aaKnown RBP16.28■□□□□ 0.2
ABCD4-228ENST00000557588 NFU1Q9UMS0 254 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 SAR1BQ9Y6B6 198 aa16.28■□□□□ 0.2
ABCD4-228ENST00000557588 A0A1W2PRB8 838 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 ALG1L2C9J202 215 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 RAMP1O60894 148 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 OR4F21O95013 312 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 IGKV1D-16P01601 117 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 OPN1LWP04000 364 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 JUNP05412 331 aaKnown RBP16.27■□□□□ 0.2
ABCD4-228ENST00000557588 NGFRP08138 427 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 CHN1P15882 459 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 SLC25A16P16260 332 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 TSPAN8P19075 237 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 DDCP20711 480 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 PAFAH1B1P43034 410 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 MAGEA12P43365 314 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 GSTM5P46439 218 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 NCBP2P52298 156 aaKnown RBP eCLIP16.27■□□□□ 0.22e-7■□□□□ 11.2
ABCD4-228ENST00000557588 CDH13P55290 713 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 IRX1P78414 480 aaPredicted RBP16.27■□□□□ 0.2
ABCD4-228ENST00000557588 ITGADQ13349 1161 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 PDSS1Q5T2R2 415 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 AGAP6Q5VW22 663 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 C11orf71Q6IPW1 123 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 ACTRT2Q8TDY3 377 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 SLC9A6Q92581 669 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 ADAD1Q96M93 576 aaKnown RBP16.27■□□□□ 0.2
ABCD4-228ENST00000557588 KLHL15Q96M94 604 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 ACPTQ9BZG2 426 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 C3orf14Q9HBI5 128 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 MED17Q9NVC6 651 aa16.27■□□□□ 0.2
ABCD4-228ENST00000557588 GOLGA8QA0A0J9YX86 632 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 GOLGA8OA6NCC3 632 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 GOLGA8NF8WBI6 632 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 GOLGA8RI6L899 631 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 KCNH1O95259 989 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 ADAP00813 363 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 KRT6AP02538 564 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 KRT6BP04259 564 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 PYGBP11216 843 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
ABCD4-228ENST00000557588 KRT6CP48668 564 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 PLTPP55058 493 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 C21orf58P58505 322 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 ACSM2AQ08AH3 577 aa16.26■□□□□ 0.19
ABCD4-228ENST00000557588 PRSS53Q2L4Q9 553 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms