RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LOC100506127A0A0U1RQW1 187 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 hCG_38984A0A1B0GV85 526 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF98A6NK75 572 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 hCG_2039718K7EN88 272 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LGALS8O00214 317 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 FBP2O00757 339 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 BUB1O43683 1085 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TOM1O60784 492 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CRTAPO75718 401 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TXNDC12O95881 172 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 KRT6BP04259 564 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 GP1BAP07359 652 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CAPN1P07384 714 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 STSP08842 583 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 GSTA2P09210 222 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 STAG3L3P0CL85 134 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 MLNP12872 115 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC130P13994 396 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SRMP19623 302 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 PKLRP30613 574 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CEACAM6P40199 344 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 KRT6CP48668 564 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 FHITP49789 147 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 RAB14P61106 215 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 RBX1P62877 108 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CSNK1G2P78368 415 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 HYAL1Q12794 435 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ART3Q13508 389 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DDX39BQ13838 428 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 OR1C1Q15619 314 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 HAGHQ16775 308 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 UPP1Q16831 310 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SPANXN4Q5MJ08 99 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 C6orf183Q5T699 404 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 PTRHD1Q6GMV3 140 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DHRS4L2Q6PKH6 230 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TRMT10CQ7L0Y3 403 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TAC4Q86UU9 113 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 PLA2G4DQ86XP0 818 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CENPLQ8N0S6 344 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LRTM2Q8N967 370 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM104Q8NE00 496 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 BEST4Q8NFU0 473 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 OR2V1Q8NHB1 315 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 FLVCR1-AS1Q8TAF5 88 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SPPL2AQ8TCT8 520 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LRRC15Q8TF66 581 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM143Q96AN5 459 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ISG20Q96AZ6 181 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF514Q96K75 400 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CYTH2Q99418 400 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DCTN5Q9BTE1 182 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LRRC2Q9BYS8 371 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 C6orf62Q9GZU0 229 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 MTIF3Q9H2K0 278 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 AKIRIN1Q9H9L7 192 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TREM1Q9NP99 234 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LZTFL1Q9NQ48 299 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 KLHL8Q9P2G9 620 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF229Q9UJW7 825 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CDH9Q9ULB4 789 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 NIP7Q9Y221 180 aaKnown RBP eCLIP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TTC37Q6PGP7 1564 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 INO80Q9ULG1 1556 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CDHR2Q9BYE9 1310 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 COL5A2P05997 1499 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LAMB4A4D0S4 1761 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 A0A0J9YYE9 177 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EFCAB7A8K855 629 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SNURFLB1AK76 121 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 GOLGA8KD6RF30 607 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 F8VP50 259 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MAGEC1O60732 1142 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CDH16O75309 829 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PSIP1O75475 530 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CSTAP01040 98 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EPOP01588 193 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TRBC1P01850 177 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 RPL35AP18077 110 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CYP2B6P20813 491 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NT5EP21589 574 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 OR1E1P30953 314 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CSNK1DP48730 415 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CASP4P49662 377 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TNFSF10P50591 281 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AP2S1P53680 142 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EMP2P54851 167 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 UCP2P55851 309 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ERVS71-1P61550 626 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TNFRSF17Q02223 184 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NPRL3Q12980 569 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NFATC2Q13469 925 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PDE7AQ13946 482 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PDK1Q15118 436 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PON2Q15165 354 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 STX1AQ16623 288 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 DNAL1Q4LDG9 190 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 LINC00242Q5T6M2 205 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SCYL2Q6P3W7 929 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ERICH5Q6P6B1 374 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms