RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PRDM14Q9GZV8 571 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 OR51I1Q9H343 314 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 FBXO34Q9NWN3 711 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ALKBH4Q9NXW9 302 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 MED11Q9P086 117 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 TNFRSF10DQ9UBN6 386 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 KCNE3Q9Y6H6 103 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 H3BNH8 94 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 LINC01387J3KSC0 135 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 STX11O75558 287 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 KRT75O95678 551 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 GUSBP08236 651 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ZCCHC18P0CG32 403 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 OR12D1P0DN82 309 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 HK1P19367 917 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 DCTP40126 519 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ZFP36L2P47974 494 aaKnown RBP11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ATP12AP54707 1039 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 SQLEQ14534 574 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 GLYR1Q49A26 553 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-209ENST00000557342 HEPHL1Q6MZM0 1159 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 APOOLQ6UXV4 268 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ZAR1Q86SH2 424 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ULK2Q8IYT8 1036 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 XAGE5Q8WWM1 108 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ASB5Q8WWX0 329 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 OIT3Q8WWZ8 545 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 INPP5KQ9BT40 448 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 RTN4RQ9BZR6 473 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 SERHL2Q9H4I8 314 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 RABEP2Q9H5N1 569 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 NPHS2Q9NP85 383 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 CAMK2AQ9UQM7 478 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 ICE1Q9Y2F5 2266 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 FLNCQ14315 2725 aa11.34□□□□□ -0.59
SLIRP-209ENST00000557342 A0A087WZY1 265 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 ZIC3O60481 467 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 CLDN14O95500 239 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 CLDN1O95832 211 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 GSNP06396 782 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.6
SLIRP-209ENST00000557342 CPN1P15169 458 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 CDKN2CP42773 168 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 GFRA1P56159 465 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 NUP107P57740 925 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 HPCAP84074 193 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 PMPCAQ10713 525 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 RCAN2Q14206 197 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 ZNF630Q2M218 657 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-209ENST00000557342 TIGD2Q4W5G0 525 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 KLHL26Q53HC5 615 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 TNFAIP8L2Q6P589 184 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-209ENST00000557342 RNF130Q86XS8 419 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 MARVELD2Q8N4S9 558 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 GATSQ8NAP1 163 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 PHOSPHO1Q8TCT1 267 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 C1GALT1C1Q96EU7 318 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
SLIRP-209ENST00000557342 WDYHV1Q96HA8 205 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 PIGQQ9BRB3 760 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 NMUR2Q9GZQ4 415 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 LIPT1Q9Y234 373 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 RPH3AQ9Y2J0 694 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-209ENST00000557342 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
SLIRP-209ENST00000557342 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-209ENST00000557342 PCNX1Q96RV3 2341 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 A0A0G2JND7 137 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 C17orf51A8MQB3 221 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 B4DXG7 233 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 EPPINO95925 133 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 GLI4P10075 376 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 PEPDP12955 493 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 NCF2P19878 526 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-209ENST00000557342 CHRNB4P30926 498 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 CASP9P55211 416 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 SUMO3P55854 103 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-209ENST00000557342 GPR68Q15743 365 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 BCL2A1Q16548 175 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 C6orf10Q5SRN2 563 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 RAET1LQ5VY80 246 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 METTL21CQ5VZV1 264 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 RTL6Q6ICC9 239 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 NCCRP1Q6ZVX7 275 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-209ENST00000557342 LACC1Q8IV20 430 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 B4GALNT2Q8NHY0 566 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 RFWD2Q8NHY2 731 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 ZPLD1Q8TCW7 415 aa11.32□□□□□ -0.6
SLIRP-209ENST00000557342 ZFP90Q8TF47 636 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms