RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ZNF33BQ06732 778 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 LGALS3BPQ08380 585 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 ABRQ12979 859 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 CCDC40Q4G0X9 1142 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 C2CD6Q53TS8 623 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
CHD8-212ENST00000557329 FAM198BQ6UWH4 519 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 CAMKMTQ7Z624 323 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 OOSP2Q86WS3 158 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 NUDT13Q86X67 352 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 CDC20BQ86Y33 519 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 CCDC71Q8IV32 467 aaPredicted RBP3.33□□□□□ -1.88
CHD8-212ENST00000557329 TAGAPQ8N103 731 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 NIPA2Q8N8Q9 360 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 POC5Q8NA72 575 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 OR4E2Q8NGC2 313 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 ATL1Q8WXF7 558 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 HSD17B8Q92506 261 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 SNX21Q969T3 373 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 TTC25Q96NG3 672 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 AGAP3Q96P47 875 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 SECISBP2Q96T21 854 aaKnown RBP3.33□□□□□ -1.88
CHD8-212ENST00000557329 TSG101Q99816 390 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 C17orf62Q9BQA9 187 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 PSD2Q9BQI7 771 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 LMF2Q9BU23 707 aaKnown RBP3.33□□□□□ -1.88
CHD8-212ENST00000557329 SPATA16Q9BXB7 569 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 SLC40A1Q9NP59 571 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 SIX2Q9NPC8 291 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 HAUS2Q9NVX0 235 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 NPAP1Q9NZP6 1156 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 DHCR7Q9UBM7 475 aaKnown RBP3.33□□□□□ -1.88
CHD8-212ENST00000557329 LHX3Q9UBR4 397 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 ZDHHC2Q9UIJ5 367 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 TMEM5Q9Y2B1 443 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 TTLL3Q9Y4R7 772 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.33□□□□□ -1.88
CHD8-212ENST00000557329 CNTRLQ7Z7A1 2325 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 VPS13CQ709C8 3753 aa3.33□□□□□ -1.88
CHD8-212ENST00000557329 IGLV3-10A0A075B6K4 115 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 A0A087WW49 117 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 MEIOCA2RUB1 952 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TRIM64A6NGJ6 449 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TRIM64BA6NI03 449 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 MAGEB17A8MXT2 336 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 IDSB3KWA1 339 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TO15178 435 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TTI1O43156 1089 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 PHF1O43189 567 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 SPRY1O43609 319 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 CRLF1O75462 422 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 CTAG2O75638 210 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 KLF7O75840 302 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 OR2B3O76000 313 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 WDPCPO95876 746 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 CAPN1P07384 714 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 HOXD4P09016 255 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 PVRP15151 417 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ZNF26P17031 533 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 VCLP18206 1134 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 CEACAM8P31997 349 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 WNT5AP41221 380 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TNFSF10P50591 281 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 BMXP51813 675 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 UBE2IP63279 158 aaKnown RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 OC90Q02509 493 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 EIF4EBP2Q13542 120 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 CUL4AQ13619 759 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 DEFB110Q30KQ9 67 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 SLC25A52Q3SY17 297 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ZFP69Q49AA0 526 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 GTDC1Q4AE62 458 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ARMC12Q5T9G4 340 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 SHEQ5VZ18 495 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 LRRC66Q68CR7 880 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TMEM211Q6ICI0 200 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 MZT2BQ6NZ67 158 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 RPUSD3Q6P087 351 aaKnown RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 ARSKQ6UWY0 536 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 LDB1Q86U70 411 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 DOLPP1Q86YN1 238 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TRAPPC5Q8IUR0 188 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ZNF683Q8IZ20 524 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 PYROXD2Q8N2H3 581 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TSPAN14Q8NG11 270 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 OR2Y1Q8NGV0 311 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 C8orf44Q96CB5 159 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 PAGE5Q96GU1 130 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 GMPPAQ96IJ6 420 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 SMIM14Q96QK8 99 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 USP28Q96RU2 1077 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 NPY6RQ99463 290 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 CHCHD6Q9BRQ6 235 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 ABHD6Q9BV23 337 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 AP1M1Q9BXS5 423 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 WDR13Q9H1Z4 485 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 CCDC68Q9H2F9 335 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms