RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	REEP5	Q00765	189 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	CTBP1	Q13363	440 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	EXOC3L2	Q2M3D2	409 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	ADPRM	Q3LIE5	342 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	AWAT1	Q58HT5	328 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	LRRC8E	Q6NSJ5	796 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	UGT3A1	Q6NUS8	523 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	TRIM40	Q6P9F5	258 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	TMEM64	Q6YI46	380 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	PPP1R21	Q6ZMI0	780 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	NUP54	Q7Z3B4	507 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	PEG10	Q86TG7	708 aa	Known RBP	4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	IFNE	Q86WN2	208 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF525	Q8N782	197 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	BANP	Q8N9N5	519 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	WDSUB1	Q8N9V3	476 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	MCU	Q8NE86	351 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	C17orf47	Q8NEP4	570 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR2L5	Q8NG80	312 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	SLC5A11	Q8WWX8	675 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	FIG4	Q92562	907 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	TANK	Q92844	425 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	NEUROG1	Q92886	237 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	ADIPOR1	Q96A54	375 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	DTNBP1	Q96EV8	351 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	RADIL	Q96JH8	1075 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	DGAT2	Q96PD7	388 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	CSF3R	Q99062	836 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAM118B	Q9BPY3	351 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	H2AFJ	Q9BTM1	129 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	RBM4	Q9BWF3	364 aa	Known RBP	4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	IL22	Q9GZX6	179 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	SPNS1	Q9H2V7	528 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	NT5DC2	Q9H857	520 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	MANSC1	Q9H8J5	431 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	SNX15	Q9NRS6	342 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	INTS10	Q9NVR2	710 aa	Known RBP	4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	KCNE5	Q9UJ90	142 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	COMMD10	Q9Y6G5	202 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076	KCNE2	Q9Y6J6	123 aa		4.17	□□□□□ -1.74
SCFD1-223	ENST00000557076		A0A0G2JN53	185 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	C2orf92	A0A1B0GVN3	265 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SYCE3	A1L190	88 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SMTNL1	A8MU46	457 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SHISA9	B4DS77	424 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076		H7C417	338 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	TRIM77	I1YAP6	450 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	AP3B1	O00203	1094 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	NDUFS8	O00217	210 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	AKR1B10	O60218	316 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	TBX6	O95947	436 aa	Predicted RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	PEPD	P12955	493 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	APEH	P13798	732 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	NMBR	P28336	390 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	TTK	P33981	857 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CETN2	P41208	172 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	PTGDS	P41222	190 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	AP1S2	P56377	157 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SCAND1	P57086	179 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SIRPA	P78324	504 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	TGM3	Q08188	693 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	LGALS3BP	Q08380	585 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SCGB2A2	Q13296	93 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CUL1	Q13616	776 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF267	Q14586	743 aa	Predicted RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	EBP	Q15125	230 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CTU2	Q2VPK5	515 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	KBTBD12	Q3ZCT8	623 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ARMC3	Q5W041	872 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	C11orf71	Q6IPW1	123 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	NEPRO	Q6NW34	567 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF549	Q6P9A3	640 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SASS6	Q6UVJ0	657 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ANGPTL8	Q6UXH0	198 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	TMIGD1	Q6UXZ0	262 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	MBOAT1	Q6ZNC8	495 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	DGAT2L6	Q6ZPD8	337 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CENPU	Q71F23	418 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SSX8	Q7RTT4	187 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	PLCZ1	Q86YW0	608 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	WDR75	Q8IWA0	830 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF540	Q8NDQ6	660 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SRFBP1	Q8NEF9	429 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR6K3	Q8NGY3	331 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	FNDC9	Q8TBE3	224 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CD200R1	Q8TD46	325 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ACTRT2	Q8TDY3	377 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF418	Q8TF45	676 aa	Predicted RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	EEF1AKMT1	Q8WVE0	214 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	KRT35	Q92764	455 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	RIT1	Q92963	219 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	PPWD1	Q96BP3	646 aa	Known RBP	4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	FBXL8	Q96CD0	374 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SFXN2	Q96NB2	322 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	GAL3ST4	Q96RP7	486 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	NDN	Q99608	321 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	GPR21	Q99679	349 aa		4.16	□□□□□ -1.74

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