RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 BLOC1S3Q6QNY0 202 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ENPP6Q6UWR7 440 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 C16orf62Q7Z3J2 963 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ZAR1Q86SH2 424 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 MRGPRGQ86SM5 289 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 IFNEQ86WN2 208 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 FUNDC1Q8IVP5 155 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF808Q8N4W9 903 aaPredicted RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 XAGE5Q8WWM1 108 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ITLN2Q8WWU7 325 aaPredicted RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ABTB1Q969K4 478 aaPredicted RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 VPS33AQ96AX1 596 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 POLE3Q9NRF9 147 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ALKBH4Q9NXW9 302 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 COQ3Q9NZJ6 369 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 CCDC167Q9P0B6 97 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 TNFRSF10DQ9UBN6 386 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 DKKL1Q9UK85 242 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 SLC6A5Q9Y345 797 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 BAHCC1Q9P281 2608 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 PHF3Q92576 2039 aaKnown RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 PCNX3Q9H6A9 2034 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ARHGAP21Q5T5U3 1957 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF407Q9C0G0 2248 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 B4DXG7 233 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 H3BNH8 94 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 LINC01387J3KSC0 135 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 FCMRO60667 390 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 HK1P19367 917 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 KHKP50053 298 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 GFRA1P56159 465 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 RCAN2Q14206 197 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 BCL2A1Q16548 175 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 TIGD2Q4W5G0 525 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 AGKQ53H12 422 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 C1orf185Q5T7R7 199 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 TNFAIP8L2Q6P589 184 aaPredicted RBP9.7□□□□□ -0.86
LINC00239-201ENST00000556973 MAMDC2Q7Z304 686 aaPredicted RBP9.7□□□□□ -0.86
LINC00239-201ENST00000556973 RNF130Q86XS8 419 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 ZFP90Q8TF47 636 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 OIT3Q8WWZ8 545 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 RND1Q92730 232 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 GTF2H4Q92759 462 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 RAB8BQ92930 207 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 ROPN1LQ96C74 230 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 SPDL1Q96EA4 605 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 C1GALT1C1Q96EU7 318 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 WDYHV1Q96HA8 205 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 UGT2B28Q9BY64 529 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 NMUR2Q9GZQ4 415 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 PRDM14Q9GZV8 571 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF350Q9GZX5 532 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 SLC6A13Q9NSD5 602 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 MRGBPQ9NV56 204 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 LIPT1Q9Y234 373 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 DTNAQ9Y4J8 743 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 POLEQ07864 2286 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 NBASA2RRP1 2371 aa9.7□□□□□ -0.86
LINC00239-201ENST00000556973 A0A087WZY1 265 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 A0A1W2PP18 115 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 C17orf51A8MQB3 221 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 FAM47E-STBD1D6RA91 191 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 NPIPB9F8W1W9 429 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 HMGN4O00479 90 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 CLDN1O95832 211 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 EPPINO95925 133 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 C1QCP02747 245 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 GP1BBP13224 206 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 ADH7P40394 386 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 ARFIP2P53365 341 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PMPCAQ10713 525 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 ART3Q13508 389 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 GPR68Q15743 365 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF141Q15928 474 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 GPAT3Q53EU6 434 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 C6orf10Q5SRN2 563 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 RTL6Q6ICC9 239 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 SLC2A7Q6PXP3 512 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 B3GNT6Q6ZMB0 384 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 ULK2Q8IYT8 1036 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 MARVELD2Q8N4S9 558 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 GATSQ8NAP1 163 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 B4GALNT2Q8NHY0 566 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PHOSPHO1Q8TCT1 267 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 ZPLD1Q8TCW7 415 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PMM1Q92871 262 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 SFXN2Q96NB2 322 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PIGQQ9BRB3 760 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 TTYH2Q9BSA4 534 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 TMEM120AQ9BXJ8 343 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PAIP1Q9H074 479 aaKnown RBP9.69□□□□□ -0.86
LINC00239-201ENST00000556973 SAP130Q9H0E3 1048 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 TPT1P8Q9HAU6 139 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 SLC52A3Q9NQ40 469 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 FGFR1OP2Q9NVK5 253 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 THUMPD1Q9NXG2 353 aaKnown RBP9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PLEKHB1Q9UF11 243 aaPredicted RBP9.69□□□□□ -0.86
LINC00239-201ENST00000556973 MKLN1Q9UL63 735 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 CAMK2AQ9UQM7 478 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 RPH3AQ9Y2J0 694 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms