RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ZNF225Q9UK10 706 aa8.04□□□□□ -1.12
HNRNPC-227ENST00000556897 TMCO1Q9UM00 188 aa8.04□□□□□ -1.12
HNRNPC-227ENST00000556897 ANK2Q01484 3957 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 A0A087WV62 115 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 A0A096LNT2 108 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 A0A0J9YW62 118 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 FAM234BA2RU67 622 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 UPK1AO00322 258 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 RAMP1O60894 148 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 PSMG1O95456 288 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ZNF17P17021 662 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 PSMA4P25789 261 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 NCBP2P52298 156 aaKnown RBP eCLIP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 LSM11P83369 360 aaKnown RBP eCLIP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 PRR5P85299 388 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 SRSF2Q01130 221 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 GUCY2DQ02846 1103 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ACSM2AQ08AH3 577 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ZNHIT3Q15649 155 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 PRSS53Q2L4Q9 553 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 TMEM249Q2WGJ8 235 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 GRAMD1BQ3KR37 738 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 SFRP5Q5T4F7 317 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ACSM2BQ68CK6 577 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 HBMQ6B0K9 141 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ZDHHC24Q6UX98 284 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 SEZ6L2Q6UXD5 910 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 TFAP2EQ6VUC0 442 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 DNAJC14Q6Y2X3 702 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ESPNLQ6ZVH7 1005 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 EXOC3L1Q86VI1 746 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 OR2L13Q8N349 312 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 GTPBP8Q8N3Z3 284 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 ROBO4Q8WZ75 1007 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 KISS1RQ969F8 398 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 APIPQ96GX9 242 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 RNF145Q96MT1 663 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 BBS4Q96RK4 519 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 NAPGQ99747 312 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 RHNO1Q9BSD3 238 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 TRAF4Q9BUZ4 470 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 C19orf24Q9BVV8 132 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 BEX2Q9BXY8 128 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 BARX1Q9HBU1 254 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 DDX18Q9NVP1 670 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 CISD1Q9NZ45 108 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 MRTO4Q9UKD2 239 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 C19orf53Q9UNZ5 99 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 SNX8Q9Y5X2 465 aa8.03□□□□□ -1.12
HNRNPC-227ENST00000556897 A0A1W2PRB8 838 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 GXYLT2A0PJZ3 443 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 DPRXA6NFQ7 191 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 A8MT66 165 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 MYO1GB0I1T2 1018 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 NDUFB5O43674 189 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 ULK1O75385 1050 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 ADAP00813 363 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 IGKV1D-16P01601 117 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 KRT6AP02538 564 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 KRT6BP04259 564 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 FESP07332 822 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 HSD3B1P14060 373 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 DDCP20711 480 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 ME2P23368 584 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 HSD3B2P26439 372 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 TIA1P31483 386 aaKnown RBP eCLIP8.02□□□□□ -1.133e-7■■■■□ 26.2
HNRNPC-227ENST00000556897 GABRA3P34903 492 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 KRT6CP48668 564 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 PSMD4P55036 377 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 CARD18P57730 90 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 C21orf58P58505 322 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 RAC1P63000 192 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 CAV1Q03135 178 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 CLCQ05315 142 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 BTKQ06187 659 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 NRF1Q16656 503 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 PLPPR5Q32ZL2 321 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 SPIN4Q56A73 249 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 TMEM201Q5SNT2 666 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 GTF2IRD2BQ6EKJ0 949 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 NUFIP2Q7Z417 695 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 GTF2IRD2Q86UP8 949 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 DTX2Q86UW9 622 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 TUSC5Q8IXB3 177 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 BANPQ8N9N5 519 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 GATSQ8NAP1 163 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 OR10H5Q8NGA6 315 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 OR4C3Q8NH37 302 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 CDC26Q8NHZ8 85 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 PIWIL2Q8TC59 973 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 RNF128Q8TEB7 428 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 PIK3R3Q92569 461 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 HTRA1Q92743 480 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 OSTF1Q92882 214 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 ZBTB8AQ96BR9 441 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 TNFRSF13CQ96RJ3 184 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 KLHDC3Q9BQ90 382 aa8.02□□□□□ -1.13
HNRNPC-227ENST00000556897 LMF2Q9BU23 707 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms