RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZC3H12DA2A288 527 aaKnown RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 SOCS6O14544 535 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 NARSO43776 548 aaKnown RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 CRYBA2P53672 197 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 RPS25P62851 125 aaKnown RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 NFATC4Q14934 902 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 OR5M3Q8NGP4 307 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 SPRYD4Q8WW59 207 aaPredicted RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 TEX101Q9BY14 249 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 PLA2G12AQ9BZM1 189 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 KCNN2Q9H2S1 579 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 BEX1Q9HBH7 125 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 EXOSC1Q9Y3B2 195 aaKnown RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 PRAMEF25A6NGN4 478 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 RHPN2P1A8MT19 583 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 CASC3O15234 703 aaKnown RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 CPMP14384 443 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 ZNF3P17036 446 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 ETV5P41161 510 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 ETV1P50549 477 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 TRA2BP62995 288 aaKnown RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 BNC1Q01954 994 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 SF3B4Q15427 424 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■□□ 17
NEK9-209ENST00000556170 ALG10BQ5I7T1 473 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 NRARPQ7Z6K4 114 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 CELF2-AS1Q8N7Q2 184 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 MFSD9Q8NBP5 474 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 SLC35A4Q96G79 324 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 CDADC1Q9BWV3 514 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 C1QTNF2Q9BXJ5 285 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 OR52D1Q9H346 318 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 Q9N2J8 555 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 MKKSQ9NPJ1 570 aaPredicted RBP13.88□□□□□ -0.19
NEK9-209ENST00000556170 CD93Q9NPY3 652 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 WBP1LQ9NX94 342 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 TAS2R7Q9NYW3 318 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 B3GNT3Q9Y2A9 372 aa13.88□□□□□ -0.19
NEK9-209ENST00000556170 GPR89AB7ZAQ6 455 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 PEX12O00623 359 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 UBXN7O94888 489 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 PPP1R3DO95685 299 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 LGI1O95970 557 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 CSTAP01040 98 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 GPR89BP0CG08 455 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 TRIM23P36406 574 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 SAMD12Q8N8I0 201 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 NLGN4YQ8NFZ3 816 aaPredicted RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 OR52I1Q8NGK6 324 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 SMAP2Q8WU79 429 aaPredicted RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 TOE1Q96GM8 510 aaKnown RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 NDC1Q9BTX1 674 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 NEK6Q9HC98 313 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 MCUBQ9NWR8 336 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 ZNF222Q9UK12 451 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 SLC9B1P1A6NJY1 282 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 CHURC1-FNTBB4DL54 471 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 CD6P30203 668 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 BLKP51451 505 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 LGALS3BPQ08380 585 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 DCST2Q5T1A1 773 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 LYSMD2Q8IV50 215 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 IZUMO1Q8IYV9 350 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 Q8N402 240 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 OR13H1Q8NG92 308 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 OR52E2Q8NGJ4 325 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 TMEM239Q8WW34 195 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 VMP1Q96GC9 406 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 SLC22A4Q9H015 551 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 SIRT3Q9NTG7 399 aaPredicted RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 GPR55Q9Y2T6 319 aaPredicted RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 CXorf51AA0A1B0GTR3 108 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 ELOA3DA6NLF2 546 aaPredicted RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 EML2O95834 649 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 OXA1LQ15070 435 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 ELOA3BQ3SY89 546 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 ZNF544Q6NX49 715 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 IL17RCQ8NAC3 791 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 ELOA3Q8NG57 546 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 RIT1Q92963 219 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 SERINC2Q96SA4 455 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 PLCXD1Q9NUJ7 323 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 COQ3Q9NZJ6 369 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 YBX2Q9Y2T7 364 aaKnown RBP13.87□□□□□ -0.19
NEK9-209ENST00000556170 KLK4Q9Y5K2 254 aa13.87□□□□□ -0.19
NEK9-209ENST00000556170 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
NEK9-209ENST00000556170 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
NEK9-209ENST00000556170 A0A1W2PQ09 198 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 SERTM1A2A2V5 107 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 ISPDA4D126 451 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 CPNE3O75131 537 aaKnown RBP13.86□□□□□ -0.19
NEK9-209ENST00000556170 KLHL18O94889 574 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 GRK6P43250 576 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 GNG2P59768 71 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 GXYLT1Q4G148 440 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 CEACAM19Q7Z692 300 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 UBE3DQ7Z6J8 389 aa13.86□□□□□ -0.19
NEK9-209ENST00000556170 OR52R1Q8NGF1 315 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms