RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 LARP4Q71RC2 724 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRKCH-218ENST00000555628 ZNF619Q8N2I2 560 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 RFLNBQ8N5W9 214 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 SEMA6DQ8NFY4 1073 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 RNF128Q8TEB7 428 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 HSD17B8Q92506 261 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 HTRA1Q92743 480 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 EFHD2Q96C19 240 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-218ENST00000555628 ERP27Q96DN0 273 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 KLHDC3Q9BQ90 382 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 HDHD5Q9BXW7 423 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 MRPL1Q9BYD6 325 aaKnown RBP8.04□□□□□ -1.12
PRKCH-218ENST00000555628 POTEKPQ9BYX7 375 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 STMN4Q9H169 189 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-218ENST00000555628 ALG9Q9H6U8 611 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 GLRX2Q9NS18 164 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 PPP4R1LQ9P1A2 415 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 XPR1Q9UBH6 696 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 ABCG2Q9UNQ0 655 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 RNF11Q9Y3C5 154 aa8.04□□□□□ -1.12
PRKCH-218ENST00000555628 C1orf226A1L170 272 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 C7orf72A4D263 438 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 ZNF814B7Z6K7 855 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 E7EQL1 145 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 SCO2O43819 266 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 PSMG1O95456 288 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 NTN1O95631 604 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 KLK1P06870 262 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 ZNF17P17021 662 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 USF1P22415 310 aaPredicted RBP8.03□□□□□ -1.12
PRKCH-218ENST00000555628 TTKP33981 857 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 GZMKP49863 264 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 CDH11P55287 796 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 CTBP2P56545 445 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 RPS3AP61247 264 aaKnown RBP8.03□□□□□ -1.12
PRKCH-218ENST00000555628 PSPHP78330 225 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 IRF9Q00978 393 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 CPSF6Q16630 551 aaKnown RBP eCLIP8.03□□□□□ -1.12
PRKCH-218ENST00000555628 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 C6orf163Q5TEZ5 329 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 FAM166AQ6J272 317 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 BHLHB9Q6PI77 547 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 APOOLQ6UXV4 268 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 NUFIP2Q7Z417 695 aaKnown RBP8.03□□□□□ -1.12
PRKCH-218ENST00000555628 COMMD6Q7Z4G1 85 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 EXOC3L1Q86VI1 746 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 TDRPQ86YL5 185 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 METTL4Q8N3J2 472 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 TEX9Q8N6V9 391 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 OR52B6Q8NGF0 335 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 TRPC4APQ8TEL6 797 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 FAM168AQ92567 244 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 EXT2Q93063 718 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 TM4SF18Q96CE8 201 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 SOX7Q9BT81 388 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 FOLH1BQ9HBA9 442 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 FBXO34Q9NWN3 711 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 FAM120CQ9NX05 1096 aaKnown RBP8.03□□□□□ -1.12
PRKCH-218ENST00000555628 ING1Q9UK53 422 aaPredicted RBP8.03□□□□□ -1.12
PRKCH-218ENST00000555628 KCNS2Q9ULS6 477 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 ACOT9Q9Y305 439 aa8.03□□□□□ -1.12
PRKCH-218ENST00000555628 IGHV4-61A0A0C4DH41 118 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 A0A0J9YW62 118 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 GOLGA6L10A6NI86 522 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 OR7A17O14581 309 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 CXCL13O43927 109 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 PLOD3O60568 738 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 ERAL1O75616 437 aaKnown RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 LY6HO94772 140 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 TUBBP07437 444 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 COX5AP20674 150 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 EDNRAP25101 427 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 SHC1P29353 583 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 IL12BP29460 328 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 PIK3CGP48736 1102 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 GP2P55259 537 aaKnown RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 SPOCK1Q08629 439 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 SQLEQ14534 574 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 SLMAPQ14BN4 828 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 MORF4L2Q15014 288 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 ZNF239Q16600 458 aaKnown RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 PDLIM3Q53GG5 364 aaPredicted RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 AGAP6Q5VW22 663 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 LIPNQ5VXI9 398 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 FAM219BQ5XKK7 198 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 GOLGA7Q7Z5G4 137 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 STK32CQ86UX6 486 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 CENPLQ8N0S6 344 aaPredicted RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 PDIK1LQ8N165 341 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 GTPBP8Q8N3Z3 284 aaPredicted RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 TRIM58Q8NG06 486 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 OR2V1Q8NHB1 315 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 STAG3L4Q8TBR4 150 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 ABHD3Q8WU67 409 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 ADAD1Q96M93 576 aaKnown RBP8.02□□□□□ -1.13
PRKCH-218ENST00000555628 SERPINI1Q99574 410 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 RBBP8Q99708 897 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 CHODLQ9H9P2 273 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 NGBQ9NPG2 151 aa8.02□□□□□ -1.13
PRKCH-218ENST00000555628 CBLN4Q9NTU7 201 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms