RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RCAN2Q14206 197 aa11□□□□□ -0.65
SRP54-206ENST00000555317 TIGD2Q4W5G0 525 aa11□□□□□ -0.65
SRP54-206ENST00000555317 NHSL2Q5HYW2 709 aa11□□□□□ -0.65
SRP54-206ENST00000555317 EMC4Q5J8M3 183 aa11□□□□□ -0.65
SRP54-206ENST00000555317 EXOSC6Q5RKV6 272 aaKnown RBP11□□□□□ -0.65
SRP54-206ENST00000555317 C6orf10Q5SRN2 563 aa11□□□□□ -0.65
SRP54-206ENST00000555317 VASNQ6EMK4 673 aa11□□□□□ -0.65
SRP54-206ENST00000555317 TNFAIP8L2Q6P589 184 aaPredicted RBP11□□□□□ -0.65
SRP54-206ENST00000555317 DNAJC14Q6Y2X3 702 aaPredicted RBP11□□□□□ -0.65
SRP54-206ENST00000555317 MSANTD1Q6ZTZ1 278 aa11□□□□□ -0.65
SRP54-206ENST00000555317 NCCRP1Q6ZVX7 275 aaPredicted RBP11□□□□□ -0.65
SRP54-206ENST00000555317 ULK2Q8IYT8 1036 aa11□□□□□ -0.65
SRP54-206ENST00000555317 GATSQ8NAP1 163 aa11□□□□□ -0.65
SRP54-206ENST00000555317 FAM110BQ8TC76 370 aa11□□□□□ -0.65
SRP54-206ENST00000555317 SDCCAG3Q96C92 435 aa11□□□□□ -0.65
SRP54-206ENST00000555317 NTNG2Q96CW9 530 aa11□□□□□ -0.65
SRP54-206ENST00000555317 NEURL3Q96EH8 262 aa11□□□□□ -0.65
SRP54-206ENST00000555317 ITCHQ96J02 903 aa11□□□□□ -0.65
SRP54-206ENST00000555317 TIMP4Q99727 224 aa11□□□□□ -0.65
SRP54-206ENST00000555317 SIKE1Q9BRV8 207 aa11□□□□□ -0.65
SRP54-206ENST00000555317 UGT2B28Q9BY64 529 aa11□□□□□ -0.65
SRP54-206ENST00000555317 OR51I1Q9H343 314 aa11□□□□□ -0.65
SRP54-206ENST00000555317 TRIM33Q9UPN9 1127 aa11□□□□□ -0.65
SRP54-206ENST00000555317 RPH3AQ9Y2J0 694 aaPredicted RBP11□□□□□ -0.65
SRP54-206ENST00000555317 MRPS18CQ9Y3D5 142 aaKnown RBP11□□□□□ -0.65
SRP54-206ENST00000555317 MAST4O15021 2626 aa11□□□□□ -0.65
SRP54-206ENST00000555317 PKDREJQ9NTG1 2253 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 FAM234BA2RU67 622 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 GTPBP1O00178 669 aaKnown RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 SCN2BO60939 215 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 STX11O75558 287 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 CLDN14O95500 239 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 KRT75O95678 551 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 POU3F2P20265 443 aaPredicted RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 MSX1P28360 303 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 CHRNB4P30926 498 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 DCTP40126 519 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 CASP9P55211 416 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 NUP107P57740 925 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 IRX1P78414 480 aaPredicted RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 TXNL4AP83876 142 aaKnown RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 SRYQ05066 204 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 ZNF630Q2M218 657 aaPredicted RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 SAXO2Q658L1 398 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 CHMP1BQ7LBR1 199 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 ZAR1Q86SH2 424 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 RNF130Q86XS8 419 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 FADS6Q8N9I5 356 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 OR2M3Q8NG83 312 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 OR9I1Q8NGQ6 314 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 OR4C3Q8NH37 302 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 GOT1L1Q8NHS2 421 aaPredicted RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 PHOSPHO1Q8TCT1 267 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 MIPOL1Q8TD10 442 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 XAGE5Q8WWM1 108 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 C1GALT1C1Q96EU7 318 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 THOC1Q96FV9 657 aaKnown RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 SH3YL1Q96HL8 342 aaPredicted RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 EBF4Q9BQW3 602 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 PIGQQ9BRB3 760 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 TTYH2Q9BSA4 534 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 PRDM14Q9GZV8 571 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 RABEP2Q9H5N1 569 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 FBXO34Q9NWN3 711 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 STOML1Q9UBI4 398 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 DCTN4Q9UJW0 460 aa10.99□□□□□ -0.65
SRP54-206ENST00000555317 KLF2Q9Y5W3 355 aaPredicted RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 INTS1Q8N201 2190 aaKnown RBP10.99□□□□□ -0.65
SRP54-206ENST00000555317 CELSR2Q9HCU4 2923 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 A0A087WZY1 265 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 A0A0G2JND7 137 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 A0A1W2PQD3 144 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 C17orf51A8MQB3 221 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 LINC01387J3KSC0 135 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 HCRTR2O43614 444 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 EDF1O60869 148 aaKnown RBP10.98□□□□□ -0.65
SRP54-206ENST00000555317 NUDT14O95848 222 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 GSNP06396 782 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 OR12D1P0DN82 309 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 GLI4P10075 376 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
SRP54-206ENST00000555317 NCF2P19878 526 aaPredicted RBP10.98□□□□□ -0.65
SRP54-206ENST00000555317 CHMP24386 653 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 HTR1EP28566 365 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 ATP12AP54707 1039 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 SQLEQ14534 574 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 GPR68Q15743 365 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 ARHGAP11BQ3KRB8 267 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 ACSF3Q4G176 576 aaPredicted RBP10.98□□□□□ -0.65
SRP54-206ENST00000555317 GPAT3Q53EU6 434 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 APOOLQ6UXV4 268 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 MTERF4Q7Z6M4 381 aaKnown RBP10.98□□□□□ -0.65
SRP54-206ENST00000555317 LACC1Q8IV20 430 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 RPRMLQ8N4K4 120 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 MARVELD2Q8N4S9 558 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 TMCO5AQ8N6Q1 288 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 CHDHQ8NE62 594 aaPredicted RBP10.98□□□□□ -0.65
SRP54-206ENST00000555317 B4GALNT2Q8NHY0 566 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 TRIB1Q96RU8 372 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms