RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 ZNF426Q9BUY5 554 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 UCK2Q9BZX2 261 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 FGF21Q9NSA1 209 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ERVK-19Q9WJR5 959 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ZNF701M0R085 212 aaPredicted RBP8.23□□□□□ -1.09
TDP1-210ENST00000554976 CLDN4O14493 209 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 XPNPEP2O43895 674 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 OR10H2O60403 315 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 CYP7B1O75881 506 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ANGPTL1O95841 491 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 GSTT2P0CG29 244 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 GSTT2BP0CG30 244 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ITIH1P19827 911 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ACAA2P42765 397 aaKnown RBP8.23□□□□□ -1.09
TDP1-210ENST00000554976 IL5RAQ01344 420 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 PIGFQ07326 219 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 STX4Q12846 297 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 EIPR1Q53HC9 387 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 PLA2G2CQ5R387 149 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 RABEPKQ7Z6M1 372 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 LSRQ86X29 649 aaPredicted RBP8.23□□□□□ -1.09
TDP1-210ENST00000554976 NKAIN4Q8IVV8 208 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 BCORP1Q8N888 145 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 BMPERQ8N8U9 685 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 OR4K5Q8NGD3 323 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 CCDC74BQ96LY2 380 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 DPYSL5Q9BPU6 564 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ITPAQ9BY32 194 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 SLC25A19Q9HC21 320 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ZNF304Q9HCX3 659 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 NINQ8N4C6 2090 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 PCSK5Q92824 1860 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 A8MU76 341 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 POU2F1P14859 743 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 GP2P55259 537 aaKnown RBP8.23□□□□□ -1.09
TDP1-210ENST00000554976 SNRPGP62308 76 aaKnown RBP8.23□□□□□ -1.09
TDP1-210ENST00000554976 HOXC5Q00444 222 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 IRF3Q14653 427 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 SLC25A30Q5SVS4 291 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 BROXQ5VW32 411 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 FAAH2Q6GMR7 532 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 SLCO6A1Q86UG4 719 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 EID2Q8N6I1 236 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 PLPP5Q8NEB5 264 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 GPR151Q8TDV0 419 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 FAR1Q8WVX9 515 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 OIT3Q8WWZ8 545 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 ING2Q9H160 280 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 PSORS1C1Q9UIG5 152 aa8.23□□□□□ -1.09
TDP1-210ENST00000554976 VSTM2BA6NLU5 285 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 CPSF4LA6NMK7 179 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 CER1O95813 267 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 ZNF883P0CG24 379 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 FBLP22087 321 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 RAB15P59190 212 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 ZFP36L1Q07352 338 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 FHL1Q13642 323 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 TRAM2Q15035 370 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 GPR68Q15743 365 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 FGD3Q5JSP0 725 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 TMEM236Q5W0B7 351 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 ZC3H14Q6PJT7 736 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 BMP8AQ7Z5Y6 402 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 OR8D4Q8NGM9 314 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 IFI44Q8TCB0 444 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 SLC41A3Q96GZ6 507 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 FNDC11Q9BVV2 318 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 PLA2G12AQ9BZM1 189 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 VN1R1Q9GZP7 353 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 FLRT3Q9NZU0 649 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 ERVK-18Q9QC07 812 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 TESQ9UGI8 421 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 PPIEQ9UNP9 301 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 C17orf105B2RV13 164 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 PIP5K1CO60331 668 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 CBFA2T3O75081 653 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 CNOT3O75175 753 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 CDK4P11802 303 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 SLC5A2P31639 672 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 ADH7P40394 386 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 FXYD6P3P58550 94 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 EMX1Q04741 257 aaPredicted RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 COX10Q12887 443 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 ZNF267Q14586 743 aaPredicted RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 LARS2Q15031 903 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 KLHL26Q53HC5 615 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 VWA2Q5GFL6 755 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 SNAP47Q5SQN1 464 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 Q6ZNX1 250 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 MBOAT2Q6ZWT7 520 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 C9orf40Q8IXQ3 194 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 LSMEM1Q8N8F7 131 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 SLC2A12Q8TD20 617 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 TMEM255BQ8WV15 326 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 RBM18Q96H35 190 aaKnown RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 LMF1Q96S06 567 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 MCHR1Q99705 422 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms