RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 POFUT2Q9Y2G5 429 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CHST2Q9Y4C5 530 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 PCDHGB6Q9Y5F9 930 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 IGHV5-51A0A0C4DH38 117 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 DPM1O60762 260 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 ACP2P11117 423 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 TNNI3P19429 210 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CHMP24386 653 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 GGT2P36268 569 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 PI4KAP42356 2102 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 RFX2P48378 723 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 PRAMEF17Q5VTA0 474 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF770Q6IQ21 691 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-212ENST00000554467 TUBA3EQ6PEY2 450 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 PODNL1Q6PEZ8 512 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 FIGNL1Q6PIW4 674 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 TTC9Q92623 222 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CHCHD6Q9BRQ6 235 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 FNDC11Q9BVV2 318 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 NXF2Q9GZY0 626 aaKnown RBP10.89□□□□□ -0.67
SHMT2-212ENST00000554467 C12orf4Q9NQ89 552 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF226Q9NYT6 803 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 STMN3Q9NZ72 180 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 KCND3Q9UK17 655 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 A8MVJ9 347 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 SHOXO15266 292 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CHST10O43529 356 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CNR2P34972 360 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CEBPEQ15744 281 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 NNATQ16517 81 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 USP53Q70EK8 1073 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 IQCHQ86VS3 1027 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 STX19Q8N4C7 294 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 BBS10Q8TAM1 723 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 ZFPM2Q8WW38 1151 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 SNAPC3Q92966 411 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 GPA33Q99795 319 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 EXOSC4Q9NPD3 245 aaKnown RBP10.89□□□□□ -0.67
SHMT2-212ENST00000554467 FSCN3Q9NQT6 498 aa10.89□□□□□ -0.67
SHMT2-212ENST00000554467 CACNA1EQ15878 2313 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 A0A1W2PQ72 361 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 AIREO43918 545 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 ALPPP05187 535 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF10P21506 573 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-212ENST00000554467 HMGA2P52926 109 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 NOXA1Q86UR1 476 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 MS4A4EQ96PG1 132 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 PITX2Q99697 317 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 ANKHQ9HCJ1 492 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 ERVK13-1Q9NX77 482 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 COQ3Q9NZJ6 369 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 LGI1O95970 557 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 STSP08842 583 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 TRHRP34981 398 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-212ENST00000554467 CAPZBP47756 277 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 ARFIP1P53367 373 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 BTG2P78543 158 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 GKN2Q86XP6 184 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF655Q8N720 491 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-212ENST00000554467 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 GUCD1Q96NT3 240 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 MAN2C1Q9NTJ4 1040 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 SLC9A8Q9Y2E8 581 aa10.88□□□□□ -0.67
SHMT2-212ENST00000554467 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 GXYLT2A0PJZ3 443 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 SYNDIG1LA6NDD5 238 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 TGFBR3LH3BV60 316 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 OR1D5P58170 312 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 STARD6P59095 220 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PRKCDQ05655 676 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 MAP4K2Q12851 820 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 MED22Q15528 200 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF628Q5EBL2 1059 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 FRRS1Q6ZNA5 592 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 OR52P1PQ8NH57 321 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 GPR151Q8TDV0 419 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 SPRTNQ9H040 489 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 SLC13A4Q9UKG4 626 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 TMEM184BQ9Y519 407 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 CEP192Q8TEP8 1941 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ASCC3Q8N3C0 2202 aaKnown RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 A0A0G2JPF8 293 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 A0A1B0GVT2 93 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 FAM221BA6H8Z2 402 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 HNRNPCL2B2RXH8 293 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 HNRNPCL3B7ZW38 293 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PEX12O00623 359 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 OR10H2O60403 315 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF780AO75290 641 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 GPR75O95800 540 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PDGFBP01127 241 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 GKN3PP0CG01 181 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 HNRNPCL4P0DMR1 293 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 IFI30P13284 250 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 GADD45AP24522 165 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ANXA11P50995 505 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms