RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 VWA5B2Q8N398 1253 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 C7orf57Q8NEG2 295 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 OR8K3Q8NH51 312 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 RIT1Q92963 219 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 NEURL3Q96EH8 262 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 RBM18Q96H35 190 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 HOPXQ9BPY8 73 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 BTBD10Q9BSF8 475 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 CLEC4MQ9H2X3 399 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 TPT1P8Q9HAU6 139 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 TMEM181Q9P2C4 612 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 SPRR3Q9UBC9 169 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 ABCD2Q9UBJ2 740 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 COPS7AQ9UBW8 275 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 C19orf53Q9UNZ5 99 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 SNX8Q9Y5X2 465 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF469Q96JG9 3925 aaPredicted RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 FAM47E-STBD1D6RA91 191 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 CLIC1O00299 241 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 NME4O00746 187 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 NME6O75414 186 aaPredicted RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 ANP32DO95626 131 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 GABRA1P14867 456 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 DNASE1P24855 282 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 SSTR4P31391 388 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 GZMMP51124 257 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC7A2P52569 658 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 MXRA7P84157 204 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF267Q14586 743 aaPredicted RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 EXOSC7Q15024 291 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 HYAL4Q2M3T9 481 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 COX20Q5RI15 118 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 RIPPLY2Q5TAB7 128 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 C16orf89Q6UX73 402 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 C6orf120Q7Z4R8 191 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF615Q8N8J6 731 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 NUP43Q8NFH3 380 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 OR8J3Q8NGG0 315 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF721Q8TF20 911 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 CADM1Q9BY67 442 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 RASSF1Q9NS23 344 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 ZCCHC3Q9NUD5 404 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 CRIM1Q9NZV1 1036 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 ERVK-19Q9WJR5 959 aa12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-202ENST00000554365 GSC2O15499 205 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 HCN1O60741 890 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 GPX2P18283 190 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 KCNJ2P63252 427 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 FOXD4Q12950 439 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 DNAL1Q4LDG9 190 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 PIGGQ5H8A4 983 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 CALHM3Q86XJ0 350 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 TRIML2Q8N7C3 387 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 OR52R1Q8NGF1 315 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 OR56A1Q8NGH5 318 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 PNPT1Q8TCS8 783 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 HOXB13Q92826 284 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 MOAP1Q96BY2 351 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 C16orf58Q96GQ5 468 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 SENP5Q96HI0 755 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 FBXL20Q96IG2 436 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 KAT8Q9H7Z6 458 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 NDE1Q9NXR1 346 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 B4GALT7Q9UBV7 327 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 PACSIN3Q9UKS6 424 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 EDARQ9UNE0 448 aa12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-202ENST00000554365 C15orf38-AP3S2A0A0A6YYH1 394 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 HSPB2A8KAH6 182 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 GYG2O15488 501 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 HMGN2P05204 90 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 RFPL3SP0C7P2 107 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 MAP3K8P41279 467 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 EMDP50402 254 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 RASSF2P50749 326 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 CASP9P55211 416 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC37A1P57057 533 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 RPS26P62854 115 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 PRR5P85299 388 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 TP53BP2Q13625 1128 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 CEACAM7Q14002 265 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 RGNQ15493 299 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 HSPB2Q16082 182 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SPDYE7PQ495Y7 208 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 MFSD12Q6NUT3 480 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 PGM2L1Q6PCE3 622 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 ARPINQ7Z6K5 226 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms