RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 FAM107AO95990 144 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 CLPSP04118 112 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 CT62P0C5K7 136 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PAX1P15863 534 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 GPC1P35052 558 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PIGAP37287 484 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 MC3RP41968 323 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 POLR2JP52435 117 aaKnown RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 NME5P56597 212 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PHC1P78364 1004 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PRR5P85299 388 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 HSPB3Q12988 150 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 RCAN2Q14206 197 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 EBPQ15125 230 aaKnown RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 LTB4RQ15722 352 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 TRMT12Q53H54 448 aaKnown RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 VASNQ6EMK4 673 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 OR4F3Q6IEY1 312 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 BHLHB9Q6PI77 547 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 BLOC1S3Q6QNY0 202 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 FAM111BQ6SJ93 734 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 SLC29A4Q7RTT9 530 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF551Q7Z340 670 aaPredicted RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 YTHDF3Q7Z739 585 aaKnown RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PIGWQ7Z7B1 504 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PM20D2Q8IYS1 436 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 DND1Q8IYX4 353 aaKnown RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF321PQ8N8H1 164 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 ADCY4Q8NFM4 1077 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 OR52R1Q8NGF1 315 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 OR56A1Q8NGH5 318 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 TP53INP1Q96A56 240 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 MARK4Q96L34 752 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 CCDC115Q96NT0 180 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 FAM107BQ9H098 131 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 OR10A5Q9H207 317 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 EXO5Q9H790 373 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 RMND5AQ9H871 391 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 C3orf14Q9HBI5 128 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 SAR1AQ9NR31 198 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 DDX18Q9NVP1 670 aaKnown RBP7.03□□□□□ -1.28
ABCD4-220ENST00000553998 TAS2R9Q9NYW1 312 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 CNIH4Q9P003 139 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 BTNL2Q9UIR0 455 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 NPFFR2Q9Y5X5 522 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 C2orf92A0A1B0GVN3 265 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TRIM64A6NGJ6 449 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TRIM64BA6NI03 449 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 HRKO00198 91 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 UPK1AO00322 258 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ACOX3O15254 700 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TRIM3O75382 744 aaPredicted RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 HPNP05981 417 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 C8BP07358 591 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 KRT16P08779 473 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 BMP7P18075 431 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 FPR1P21462 350 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 SSTR4P31391 388 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 MAGEA8P43361 318 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 PPICP45877 212 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TRPC1P48995 793 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 CDK9P50750 372 aaKnown RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 HBA1P69905 142 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TXNL4AP83876 142 aaKnown RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 KRTAP1-1Q07627 177 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 DUSP8Q13202 625 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 MAPRE2Q15555 327 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ACKR1Q16570 336 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 SPDYE7PQ495Y7 208 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 VPS26BQ4G0F5 336 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 AGKQ53H12 422 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 HLA-DQA1Q5Y7H0 255 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ZCCHC12Q6PEW1 402 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TMEM107Q6UX40 140 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 FUNDC1Q8IVP5 155 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 C9orf40Q8IXQ3 194 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 TRIML2Q8N7C3 387 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ZNF441Q8N8Z8 693 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 OR7G2Q8NG99 324 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 OR4A15Q8NGL6 344 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 OR9I1Q8NGQ6 314 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 SLC22A8Q8TCC7 542 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ZPLD1Q8TCW7 415 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 SFXN5Q8TD22 340 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 IGFBPL1Q8WX77 278 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 KAT2AQ92830 837 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 HSPBAP1Q96EW2 488 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 ITCHQ96J02 903 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 VSTM2LQ96N03 204 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 MS4A4EQ96PG1 132 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 OR52E6Q96RD3 313 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 UCN2Q96RP3 112 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 CCT8L2Q96SF2 557 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 SECISBP2Q96T21 854 aaKnown RBP7.02□□□□□ -1.29
ABCD4-220ENST00000553998 GSX2Q9BZM3 304 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 NMUR2Q9GZQ4 415 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 WWTR1Q9GZV5 400 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 SLC6A15Q9H2J7 730 aa7.02□□□□□ -1.29
ABCD4-220ENST00000553998 UBQLN3Q9H347 655 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms