RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 EPGNQ6UW88 154 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 APOOLQ6UXV4 268 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 CHMP1BQ7LBR1 199 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 CCDC71Q8IV32 467 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-204ENST00000553324 OR5AK3PQ8NH89 298 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 MIPOL1Q8TD10 442 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 MARVELD3Q96A59 401 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 C1GALT1C1Q96EU7 318 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 CCDC115Q96NT0 180 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 OR7D2Q96RA2 312 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 OR52E6Q96RD3 313 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 UCN2Q96RP3 112 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 SPOCK3Q9BQ16 436 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 ZNF629Q9UEG4 869 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-204ENST00000553324 Q9UFV3 132 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 RPH3AQ9Y2J0 694 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-204ENST00000553324 USH1CQ9Y6N9 552 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 PCNX1Q96RV3 2341 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 H0Y3Z8 333 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 ZNF195O14628 629 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 CEACAM8P31997 349 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 CHI3L1P36222 383 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 LHX2P50458 406 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 ANXA11P50995 505 aaKnown RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 ATP12AP54707 1039 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 NME5P56597 212 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 EEF1A1P68104 462 aaKnown RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 FLYWCH1Q4VC44 716 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 CCNJQ5T5M9 372 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 ATAD3BQ5T9A4 648 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 EEF1A1P5Q5VTE0 462 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 RAET1LQ5VY80 246 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 GALNT10Q86SR1 603 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 CHDHQ8NE62 594 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 OTUB1Q96FW1 271 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 SLC35G5Q96KT7 338 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 TEX37Q96LM6 180 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 PANX1Q96RD7 426 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 TRIB1Q96RU8 372 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 RTN4RQ9BZR6 473 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 SLC24A3Q9HC58 644 aa13.9□□□□□ -0.18
SHMT2-204ENST00000553324 SDR39U1Q9NRG7 319 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-204ENST00000553324 NCOA6Q14686 2063 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-204ENST00000553324 DVL2O14641 736 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 STX11O75558 287 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 GUSBP08236 651 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF708P17019 499 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 ADH7P40394 386 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 IRX1P78414 480 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-204ENST00000553324 SRYQ05066 204 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 ARHGAP11BQ3KRB8 267 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 KLHL26Q53HC5 615 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 DCST1Q5T197 706 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 SEM1Q6ZVN7 128 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 MIER2Q8N344 545 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 MEIOBQ8N635 442 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 OIT3Q8WWZ8 545 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 WNT2BQ93097 391 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 ZBTB8AQ96BR9 441 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 NEURL3Q96EH8 262 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 ZFP3Q96NJ6 502 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 SDF2Q99470 211 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 TM9SF2Q99805 663 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 NMUR2Q9GZQ4 415 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 ENKD1Q9H0I2 346 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 RMND5AQ9H871 391 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 FBXO34Q9NWN3 711 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 AP4B1Q9Y6B7 739 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 EXPH5Q8NEV8 1989 aa13.89□□□□□ -0.19
SHMT2-204ENST00000553324 MBD3L4A6NDZ8 208 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 MBD3L3A6NE82 208 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 MBD3L5A6NJ08 208 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 FAM90A27PA6NNH2 459 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 B4DXG7 233 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 GTPBP1O00178 669 aaKnown RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 TOXO94900 526 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF17P17021 662 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 POU3F2P20265 443 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 IL12AP29459 219 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 PEX19P40855 299 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 MAGEA8P43361 318 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 STARP49675 285 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF41P51814 821 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 DGKQP52824 942 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 B3GALT5-AS1P59052 145 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 SAXO2Q658L1 398 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF621Q6ZSS3 439 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 MSANTD1Q6ZTZ1 278 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 C16orf62Q7Z3J2 963 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 MAVSQ7Z434 540 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ZAR1Q86SH2 424 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ADGRE4PQ86SQ3 457 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 OR5D16Q8NGK9 328 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 B4GALNT2Q8NHY0 566 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms