RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 IQCGQ9H095 443 aaKnown RBP11.52□□□□□ -0.57
PTCH1-221ENST00000550914 CXorf56Q9H5V9 222 aa11.52□□□□□ -0.57
PTCH1-221ENST00000550914 RRAGDQ9NQL2 400 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-221ENST00000550914 NTMQ9P121 344 aa11.52□□□□□ -0.57
PTCH1-221ENST00000550914 MCTS1Q9ULC4 181 aaKnown RBP11.52□□□□□ -0.57
PTCH1-221ENST00000550914 UQCRHLA0A096LP55 91 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 NPIPB8E9PQR5 432 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 UBFD1O14562 309 aaKnown RBP11.51□□□□□ -0.57
PTCH1-221ENST00000550914 EIF1AYO14602 144 aaKnown RBP11.51□□□□□ -0.57
PTCH1-221ENST00000550914 URI1O94763 535 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-221ENST00000550914 NKX2-2O95096 273 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 IGKV1D-16P01601 117 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 PRPS2P11908 318 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 PRPH2P23942 346 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 PCSK6P29122 969 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 SLC6A8P48029 635 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 FOXA1P55317 472 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 RAC1P63000 192 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 EXOC3L2Q2M3D2 409 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 ANKRD34AQ69YU3 496 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 ZNF704Q6ZNC4 412 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-221ENST00000550914 ESPNLQ6ZVH7 1005 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 STK32CQ86UX6 486 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 EXOC3L1Q86VI1 746 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 CCNYL1Q8N7R7 359 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 ZNF611Q8N823 705 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 CDRT4Q8N9R6 151 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 NOA1Q8NC60 698 aaKnown RBP11.51□□□□□ -0.57
PTCH1-221ENST00000550914 OR10D3Q8NH80 312 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 CEP70Q8NHQ1 597 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 GPR151Q8TDV0 419 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 TMEM204Q9BSN7 226 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 DCDC2Q9UHG0 476 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 VDAC3Q9Y277 283 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 GPR52Q9Y2T5 361 aa11.51□□□□□ -0.57
PTCH1-221ENST00000550914 POLR3HQ9Y535 204 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-221ENST00000550914 GXYLT2A0PJZ3 443 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 HS3ST1O14792 307 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 PDPK1O15530 556 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 NDUFB5O43674 189 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 TBX19O60806 448 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 SYNGR4O95473 234 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 OXSR1O95747 527 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-221ENST00000550914 PSMB1P20618 241 aaKnown RBP11.5□□□□□ -0.57
PTCH1-221ENST00000550914 ME2P23368 584 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 PSMA4P25789 261 aaKnown RBP11.5□□□□□ -0.57
PTCH1-221ENST00000550914 RFX3P48380 749 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 CTU2Q2VPK5 515 aaKnown RBP11.5□□□□□ -0.57
PTCH1-221ENST00000550914 PDSS1Q5T2R2 415 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 CPTPQ5TA50 214 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 GTF2IRD2BQ6EKJ0 949 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 ADAM5Q6NVV9 412 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 ZYG11AQ6WRX3 759 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 FRMD7Q6ZUT3 714 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 ZNF551Q7Z340 670 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-221ENST00000550914 GTF2IRD2Q86UP8 949 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 MISPQ8IVT2 679 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 OR6Y1Q8NGX8 325 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 OR4C3Q8NH37 302 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 ZFP28Q8NHY6 868 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 FAM110BQ8TC76 370 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 PSMC3IPQ9P2W1 217 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-221ENST00000550914 CCL27Q9Y4X3 112 aa11.5□□□□□ -0.57
PTCH1-221ENST00000550914 A0A1W2PRB8 838 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-221ENST00000550914 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 G3V2L1 256 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 RIPK2O43353 540 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 CRCPO75575 148 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 HSPA4LO95757 839 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 TUBBP07437 444 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 PABPC4LP0CB38 370 aaKnown RBP11.49□□□□□ -0.57
PTCH1-221ENST00000550914 UROSP10746 265 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 MYL2P10916 166 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 PYGBP11216 843 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 GPC1P35052 558 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 FRKP42685 505 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-221ENST00000550914 ZNF41P51814 821 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-221ENST00000550914 DNAJB13P59910 316 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 KIAA0040Q15053 153 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 ETFDHQ16134 617 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 PLPPR5Q32ZL2 321 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 ZCCHC12Q6PEW1 402 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 GALNT10Q86SR1 603 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 HOMEZQ8IX15 550 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 STEAP2Q8NFT2 490 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 OR2V1Q8NHB1 315 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 PIK3R3Q92569 461 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 ZBED6CLQ96FA7 236 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-221ENST00000550914 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 MS4A4EQ96PG1 132 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 CCT7Q99832 543 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 HDHD5Q9BXW7 423 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 ACTR6Q9GZN1 396 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 UBQLN4Q9NRR5 601 aa11.49□□□□□ -0.57
PTCH1-221ENST00000550914 ACSS1Q9NUB1 689 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-221ENST00000550914 MED17Q9NVC6 651 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms