RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CCR8P51685 355 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 EMP2P54851 167 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 HNRNPH2P55795 449 aaKnown RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 RAB8AP61006 207 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 CDC16Q13042 620 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 TSTA3Q13630 321 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 RBBP7Q16576 425 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SFT2D3Q587I9 215 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 TOR1AIP1Q5JTV8 583 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 CDKL4Q5MAI5 379 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 TCHHL1Q5QJ38 904 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 QSOX2Q6ZRP7 698 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 C3orf62Q6ZUJ4 267 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 NDUFAF7Q7L592 441 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF527Q8NB42 609 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ACBD4Q8NC06 268 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 PLPP5Q8NEB5 264 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 OR52B6Q8NGF0 335 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 MAGEC3Q8TD91 643 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 MCOLN3Q8TDD5 553 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 GRHL3Q8TE85 626 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 PYROXD1Q8WU10 500 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SLC13A3Q8WWT9 602 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 OIT3Q8WWZ8 545 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ANKRD9Q96BM1 317 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 C11orf24Q96F05 449 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF479Q96JC4 524 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 IP6K3Q96PC2 410 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 OR1F2PQ96R84 312 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 PAFAH2Q99487 392 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 MAPKAP1Q9BPZ7 522 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 TMEM120AQ9BXJ8 343 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 MYLK2Q9H1R3 596 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 EHD1Q9H4M9 534 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 NT5DC2Q9H857 520 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 PROK2Q9HC23 129 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SIRT3Q9NTG7 399 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 DEPPQ9NTK1 212 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 LIN7CQ9NUP9 197 aaKnown RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 DTX4Q9Y2E6 619 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 NUP214P35658 2090 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 RAI1Q7Z5J4 1906 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-214ENST00000550893 A0A0A6YYD5 115 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 MBD3L5A6NJ08 208 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 SAGE2PA6NJ88 616 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 EIF4E1BA6NMX2 242 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PLPP1O14494 284 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 MAP2K7O14733 419 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 FGF17O60258 216 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 DPM1O60762 260 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ACSL3O95573 720 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 SHBGP04278 402 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 IGKV3-11P04433 115 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 NGFRP08138 427 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 GSTA2P09210 222 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 C8orf89P0DMQ9 161 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 C1GALT1C1LP0DN25 315 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 HRH2P25021 359 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ITGA3P26006 1051 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 CASQ1P31415 396 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 BSGP35613 385 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 HNF4AP41235 474 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 LIM2P55344 173 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ADORA2A-AS1P86434 159 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 NAA25Q14CX7 972 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ABRAXAS2Q15018 415 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PFKFB4Q16877 469 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 WHAMMP3Q1A5X7 153 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 EIF2S3LQ2VIR3 472 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 XKR6Q5GH73 641 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 C8orf74Q6P047 294 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 RPUSD3Q6P087 351 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PAPD4Q6PIY7 484 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 TMIGD1Q6UXZ0 262 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 LINC00696Q6ZRV3 163 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 LRRC70Q7Z2Q7 622 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 GOLGA7Q7Z5G4 137 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 CPEB2Q7Z5Q1 589 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ADCK2Q7Z695 626 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 TMEM200AQ86VY9 491 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 CCDC25Q86WR0 208 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 MARVELD2Q8N4S9 558 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 NKAPQ8N5F7 415 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF441Q8N8Z8 693 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 TEX19Q8NA77 164 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 CAMKVQ8NCB2 501 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 OR2L5Q8NG80 312 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 OR7G3Q8NG95 312 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 RHEBL1Q8TAI7 183 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 FAM110DQ8TAY7 271 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PTPMT1Q8WUK0 201 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 EXT2Q93063 718 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 TBC1D20Q96BZ9 403 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 F2RL3Q96RI0 385 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms