RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 WDFY2Q96P53 400 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CCNL2Q96S94 520 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 NELL2Q99435 816 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 RSPO3Q9BXY4 272 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 NDEL1Q9GZM8 345 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 KCNN2Q9H2S1 579 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 C6orf106Q9H6K1 298 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 Q9N2J8 555 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 ABCB10Q9NRK6 738 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 ASB6Q9NWX5 421 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TNFRSF10DQ9UBN6 386 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 ADAM30Q9UKF2 790 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SLC6A14Q9UN76 642 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CYP8B1Q9UNU6 501 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 PLCL2Q9UPR0 1127 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CMAHPQ9Y471 501 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 ATG2AQ2TAZ0 1938 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CEP350Q5VT06 3117 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TICRRQ7Z2Z1 1910 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 TRDV1A0A1B0GX56 115 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 A0A1W2PS29 197 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SYNDIG1LA6NDD5 238 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF860A6NHJ4 632 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC22A31A6NKX4 558 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 C2CD4DB7Z1M9 353 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 RGS5O15539 181 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF749O43361 778 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 TBX1O43435 398 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 CHP2O43745 196 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 LDB3O75112 727 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PPM1BO75688 479 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 NSA2O95478 260 aaKnown RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 IGHA1P01876 353 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 HBQ1P09105 142 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 IFI30P13284 250 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PVRP15151 417 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 DRD5P21918 477 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PTBP1P26599 531 aaKnown RBP eCLIP8.31□□□□□ -1.082e-7■■■■□ 21.3
TMEM116-209ENST00000550020 CD27P26842 260 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC6A6P31641 620 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PTGER1P34995 402 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ETV5P41161 510 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 MAP3K8P41279 467 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC1A3P43003 542 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 CRYBB2P43320 205 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 GPR4P46093 362 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 FASLGP48023 281 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ETV1P50549 477 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 RNF144AP50876 292 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 GPR143P51810 404 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF136P52737 540 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 CTBP2P56545 445 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 HSD17B7P56937 341 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 RPS3AP61247 264 aaKnown RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ACTC1P68032 377 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ACTA1P68133 377 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC13A2Q13183 592 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SMAD4Q13485 552 aaKnown RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PRTGQ2VWP7 1150 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 FLYWCH1Q4VC44 716 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 CLEC12AQ5QGZ9 265 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 DDI2Q5TDH0 399 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 LIPKQ5VXJ0 399 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 MZT2AQ6P582 158 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SMARCD3Q6STE5 483 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 OLIG3Q7RTU3 272 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 HMGN2P46Q86SG4 172 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 NKAIN4Q8IVV8 208 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 GPALPP1Q8IXQ4 340 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC22A18ASQ8N1D0 253 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 LNX2Q8N448 690 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 OR52R1Q8NGF1 315 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 OR4C6Q8NH72 309 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 RNF217Q8TC41 542 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 TMEM255BQ8WV15 326 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 RIT1Q92963 219 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC25A46Q96AG3 418 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 KIAA1143Q96AT1 154 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ANKRD9Q96BM1 317 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ZG16BQ96DA0 208 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 BPIFA2Q96DR5 249 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 DGAT2Q96PD7 388 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 GPA33Q99795 319 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ARHGAP9Q9BRR9 750 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 GPR174Q9BXC1 333 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ALOXE3Q9BYJ1 711 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PLA2G12AQ9BZM1 189 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 HOXD1Q9GZZ0 328 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 CHRNA10Q9GZZ6 450 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 KLHL25Q9H0H3 589 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 UBQLN3Q9H347 655 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SYNPO2LQ9H987 977 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 ANKRA2Q9H9E1 313 aa8.31□□□□□ -1.08
TMEM116-209ENST00000550020 TXNL4BQ9NX01 149 aaKnown RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 SIDT1Q9NXL6 827 aaKnown RBP8.31□□□□□ -1.08
TMEM116-209ENST00000550020 PRODH2Q9UF12 536 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms