RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TTC26A0AVF1 554 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 TMEM89A2RUT3 159 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 E9PLD3 99 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 K7ENP7 123 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 TRAF3IP2O43734 574 aaPredicted RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 TRIM3O75382 744 aaPredicted RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF324O75467 553 aaPredicted RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 IGKV2D-28P01615 120 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 RALAP11233 206 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 GCFC2P16383 781 aaKnown RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 AXLP30530 894 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 GFPT1Q06210 699 aaPredicted RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 ACTN3Q08043 901 aaPredicted RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 HFEQ30201 348 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 SERPINA9Q86WD7 417 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 ARFGAP2Q8N6H7 521 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 MARCH1Q8TCQ1 289 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 ATP6V0A1Q93050 837 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 ATP6V0BQ99437 205 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 SIRPDQ9H106 197 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 PNO1Q9NRX1 252 aaKnown RBP2.3□□□□□ -2.04
CCDC38-204ENST00000546816 MTRRQ9UBK8 725 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 DNPEPQ9ULA0 475 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 DUSP12Q9UNI6 340 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 GMPPBQ9Y5P6 360 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 PARD3Q8TEW0 1356 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 A0A0U1RRA0 63 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 A0A1W2PQ67 120 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 DDX39AO00148 427 aaKnown RBP2.29□□□□□ -2.04
CCDC38-204ENST00000546816 IMPA2O14732 288 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 ZBTB14O43829 449 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 VEGFDO43915 354 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 SCRG1O75711 98 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 JCHAINP01591 159 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 HLA-DPA1P20036 260 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 HTR1FP30939 366 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 CTRLP40313 264 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 NUP107P57740 925 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 PFN3P60673 137 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 C17orf67Q0P5P2 114 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 DPYSL3Q14195 570 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 LASP1Q14847 261 aaKnown RBP2.29□□□□□ -2.04
CCDC38-204ENST00000546816 LRRC36Q1X8D7 754 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 LIPKQ5VXJ0 399 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 BTNL3Q6UXE8 466 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 TMEM184AQ6ZMB5 413 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 TAF8Q7Z7C8 310 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 C17orf82Q86X59 251 aaPredicted RBP2.29□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF100Q8IYN0 542 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 BPIFB2Q8N4F0 458 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 DQX1Q8TE96 717 aaKnown RBP2.29□□□□□ -2.04
CCDC38-204ENST00000546816 DCUN1D4Q92564 292 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 TAF4BQ92750 862 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 KRT35Q92764 455 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 ART4Q93070 314 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 MYDGFQ969H8 173 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 TADA1Q96BN2 335 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 NMNAT2Q9BZQ4 307 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 ANKMY1Q9P2S6 941 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 SPRR3Q9UBC9 169 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 DCDC2Q9UHG0 476 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 LCMT1Q9UIC8 334 aa2.29□□□□□ -2.04
CCDC38-204ENST00000546816 NAP1L2Q9ULW6 460 aaPredicted RBP2.29□□□□□ -2.04
CCDC38-204ENST00000546816 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.29□□□□□ -2.04
CCDC38-204ENST00000546816 GAKO14976 1311 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 SPAG9O60271 1321 aaKnown RBP2.28□□□□□ -2.04
CCDC38-204ENST00000546816 ARHGAP42A6NI28 874 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 PPIHO43447 177 aaKnown RBP2.28□□□□□ -2.04
CCDC38-204ENST00000546816 SSX5O60225 188 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 ANP32DO95626 131 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 BAG2O95816 211 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 CD1BP29016 333 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 PMELP40967 661 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 STARP49675 285 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
CCDC38-204ENST00000546816 GPNMBQ14956 572 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 PNCKQ6P2M8 343 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 NEK5Q6P3R8 708 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 DNM1P46Q6ZS02 220 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 ADAMTSL2Q86TH1 951 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 ALLCQ8N6M5 410 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 ANKRD20A12PQ8NF67 263 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 OR9A1PQ8NGU1 263 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 PSMG2Q969U7 264 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 NCLNQ969V3 563 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 TMEM186Q96B77 213 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 PINX1Q96BK5 328 aaKnown RBP2.28□□□□□ -2.04
CCDC38-204ENST00000546816 APMAPQ9HDC9 416 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 TRPV5Q9NQA5 729 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 NDUFA13Q9P0J0 144 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 IL19Q9UHD0 177 aa2.28□□□□□ -2.04
CCDC38-204ENST00000546816 THSD7BQ9C0I4 1608 aa2.28□□□□□ -2.05
CCDC38-204ENST00000546816 PLEKHG1Q9ULL1 1385 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 TRBV6-6A0A0A6YYG2 114 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 A0A0J9YXY3 114 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 H3BMH7 237 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 KERAO60938 352 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 HMOX1P09601 288 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms