RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
SCAF11-208ENST00000546534 GPR78Q96P69 363 aa11.32□□□□□ -0.6
SCAF11-208ENST00000546534 MANSC1Q9H8J5 431 aa11.32□□□□□ -0.6
SCAF11-208ENST00000546534 PCTPQ9UKL6 214 aa11.32□□□□□ -0.6
SCAF11-208ENST00000546534 ALPK2Q86TB3 2170 aa11.32□□□□□ -0.6
SCAF11-208ENST00000546534 IGLV3-32A0A0A0MS00 114 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 A0A0J9YW62 118 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 TNFSF11O14788 317 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 DLX3O60479 287 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 ANGPTL1O95841 491 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 ADAP00813 363 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 IGFBP5P24593 272 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 RFX3P48380 749 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 C17orf67Q0P5P2 114 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 DECR1Q16698 335 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 GGTA1PQ4G0N0 100 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 GTF2IRD2BQ6EKJ0 949 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 GTF2IRD2Q86UP8 949 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 SAMD14Q8IZD0 417 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-208ENST00000546534 FAM9CQ8IZT9 166 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 SELENOMQ8WWX9 145 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 OSTF1Q92882 214 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 KISS1RQ969F8 398 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-208ENST00000546534 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 CACNG6Q9BXT2 260 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 TBL1XR1Q9BZK7 514 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 TMEM185BQ9H7F4 350 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 FAIMQ9NVQ4 179 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 SENP1Q9P0U3 644 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 CADP27708 2225 aa11.31□□□□□ -0.6
SCAF11-208ENST00000546534 TMEM229AB2RXF0 380 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 PPP6CO00743 305 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCAF11-208ENST00000546534 KLHL2O95198 593 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 UTS2O95399 124 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 IL33O95760 270 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 GSTA2P09210 222 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 SLC25A16P16260 332 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 ZNF17P17021 662 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 PSMA4P25789 261 aaKnown RBP11.3□□□□□ -0.6
SCAF11-208ENST00000546534 CDH11P55287 796 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 RAC1P63000 192 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 CSTF3Q12996 717 aaKnown RBP11.3□□□□□ -0.6
SCAF11-208ENST00000546534 TMEM201Q5SNT2 666 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 MROH9Q5TGP6 573 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 AGAP6Q5VW22 663 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 HBMQ6B0K9 141 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 KLC3Q6P597 504 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 ESPNLQ6ZVH7 1005 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 RPS27LQ71UM5 84 aaKnown RBP11.3□□□□□ -0.6
SCAF11-208ENST00000546534 CCDC91Q7Z6B0 441 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 CCDC25Q86WR0 208 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 GTPBP8Q8N3Z3 284 aaPredicted RBP11.3□□□□□ -0.6
SCAF11-208ENST00000546534 BANPQ8N9N5 519 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 SLC9A6Q92581 669 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 POTEKPQ9BYX7 375 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 BRF2Q9HAW0 419 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 SLC35C2Q9NQQ7 365 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 NMRK1Q9NWW6 199 aa11.3□□□□□ -0.6
SCAF11-208ENST00000546534 A0A096LPK6 155 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 HMX2A2RU54 273 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 COQ9O75208 318 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 CHN1P15882 459 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 TCP1P17987 556 aaKnown RBP11.29□□□□□ -0.6
SCAF11-208ENST00000546534 MPIP34949 423 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 CARD18P57730 90 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 MRPS25P82663 173 aaKnown RBP11.29□□□□□ -0.6
SCAF11-208ENST00000546534 PRR5P85299 388 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 ITGADQ13349 1161 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 P2RY6Q15077 328 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 RAB35Q15286 201 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 ZNF239Q16600 458 aaKnown RBP11.29□□□□□ -0.6
SCAF11-208ENST00000546534 GRAMD1BQ3KR37 738 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 TECRLQ5HYJ1 363 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 FAM120AOSQ5T036 256 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 LIPNQ5VXI9 398 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 LETMD1Q6P1Q0 360 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
SCAF11-208ENST00000546534 TUSC5Q8IXB3 177 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 RNF128Q8TEB7 428 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 FAM168AQ92567 244 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 RNF145Q96MT1 663 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 PLA2G12AQ9BZM1 189 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 Q9N2J8 555 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 MCM8Q9UJA3 840 aa11.29□□□□□ -0.6
SCAF11-208ENST00000546534 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
SCAF11-208ENST00000546534 A0A087WV62 115 aa11.28□□□□□ -0.6
SCAF11-208ENST00000546534 A0A087WZY1 265 aa11.28□□□□□ -0.6
SCAF11-208ENST00000546534 A0A1W2PRB8 838 aa11.28□□□□□ -0.6
SCAF11-208ENST00000546534 ZNF814B7Z6K7 855 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms