RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PCSK4Q6UW60 755 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 IGFL2Q6UWQ7 119 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 IGFL3Q6UXB1 125 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF621Q6ZSS3 439 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ASB18Q6ZVZ8 466 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 RNF130Q86XS8 419 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 HPS6Q86YV9 775 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC44A2Q8IWA5 706 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 MSRB3Q8IXL7 192 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 GPALPP1Q8IXQ4 340 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 DND1Q8IYX4 353 aaKnown RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 PRR22Q8IZ63 422 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC34A3Q8N130 599 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 DPP10Q8N608 796 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC15A4Q8N697 577 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 COX18Q8N8Q8 333 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC16A11Q8NCK7 471 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 OR5D16Q8NGK9 328 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 PNPT1Q8TCS8 783 aaKnown RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 MIPOL1Q8TD10 442 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 GPR151Q8TDV0 419 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ZFP90Q8TF47 636 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC9A6Q92581 669 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 RCN3Q96D15 328 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 OMA1Q96E52 524 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 HSPBAP1Q96EW2 488 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 RMND5BQ96G75 393 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 C16orf58Q96GQ5 468 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 STACQ99469 402 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CPPED1Q9BRF8 314 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 UTP23Q9BRU9 249 aaKnown RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 YIPF4Q9BSR8 244 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CCDC106Q9BWC9 280 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ACTRT3Q9BYD9 372 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 PAIP1Q9H074 479 aaKnown RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CNTD2Q9H8S5 307 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF71Q9NQZ8 489 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 DUSP22Q9NRW4 184 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ANKRD10Q9NXR5 420 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC25A37Q9NYZ2 338 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 VAPAQ9P0L0 249 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CSAG2Q9Y5P2 127 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SHANK1Q9Y566 2161 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 FREM3P0C091 2139 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 HEATR5AQ86XA9 2040 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 TRAV17A0A0B4J275 112 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 GXYLT2A0PJZ3 443 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 ASNA1O43681 348 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 DPM1O60762 260 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 NEURL1O76050 574 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 KRT75O95678 551 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 C1QCP02747 245 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 SFTPCP11686 197 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 COX4I1P13073 169 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PPIBP23284 216 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 IL12BP29460 328 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PRDX6P30041 224 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 GABRA3P34903 492 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 KRT20P35900 424 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PIGAP37287 484 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 MAGEA8P43361 318 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 RFX3P48380 749 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 MAN2A2P49641 1150 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 NUDT2P50583 147 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 TNFSF10P50591 281 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 HLCSP50747 726 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 ANXA11P50995 505 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 MVDP53602 400 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CASP9P55211 416 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 FBXW4P57775 412 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 POU6F2P78424 691 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 MRPS22P82650 360 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 TXNL4AP83876 142 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 HPCAP84074 193 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 FUT5Q11128 374 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 FADDQ13158 208 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 STX5Q13190 355 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 LY6DQ14210 128 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CAPRIN1Q14444 709 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 OR1C1Q15619 314 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 NTRK2Q16620 822 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 DECR1Q16698 335 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF791Q3KP31 576 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 DCST2Q5T1A1 773 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 DLEU7Q6UYE1 221 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 RPTNQ6XPR3 784 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 RTL4Q6ZR62 310 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 C16orf62Q7Z3J2 963 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 C6orf120Q7Z4R8 191 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 ZADH2Q8N4Q0 377 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 FITM2Q8N6M3 262 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 HORMAD2Q8N7B1 307 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 RBMXL3Q8N7X1 1067 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 EXD3Q8N9H8 876 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PCYOX1LQ8NBM8 494 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 MDS2Q8NDY4 140 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 OR10G3Q8NGC4 313 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 OR4N2Q8NGD1 307 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms