RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 NUDCD3Q8IVD9 361 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 KIRREL3Q8IZU9 778 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 GTPBP8Q8N3Z3 284 aaPredicted RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 METTL25Q8N6Q8 603 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 FNDC5Q8NAU1 212 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SLC16A11Q8NCK7 471 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 OR56A1Q8NGH5 318 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 OR4C3Q8NH37 302 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 AGR3Q8TD06 166 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 ACTRT2Q8TDY3 377 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SMPDL3BQ92485 455 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 FIG4Q92562 907 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 CAVIN3Q969G5 261 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 ZBTB8AQ96BR9 441 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 MOAP1Q96BY2 351 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 TUBGCP3Q96CW5 907 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 STARD4Q96DR4 205 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 FAM120BQ96EK7 910 aaKnown RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 GIMAP5Q96F15 307 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PGM2Q96G03 612 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 ZNF845Q96IR2 970 aaPredicted RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 ZIM3Q96PE6 472 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 BTBD2Q9BX70 525 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PRRG4Q9BZD6 226 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 RTN4RQ9BZR6 473 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 HOXD1Q9GZZ0 328 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 CXXC4Q9H2H0 198 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PIGUQ9H490 435 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 FANCFQ9NPI8 374 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 GIN1Q9NXP7 522 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 MCTS1Q9ULC4 181 aaKnown RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 FAF1Q9UNN5 650 aaPredicted RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 PLEKHA6Q9Y2H5 1048 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SNX8Q9Y5X2 465 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 A0A1W2PQD3 144 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 SYNGR4O95473 234 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 HMGN2P05204 90 aaKnown RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 CD8BP10966 210 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 LAMP1P11279 417 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 EFNA1P20827 205 aaPredicted RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 ME2P23368 584 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 CPOXP36551 454 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 EIF1P41567 113 aaKnown RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 KIR2DL2P43627 348 aaPredicted RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 KCNJ5P48544 419 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 SUCLG1P53597 346 aaKnown RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 CLDN20P56880 219 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 RAC1P63000 192 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 TP53BP2Q13625 1128 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 LASP1Q14847 261 aaKnown RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 TMEM44Q2T9K0 475 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 SMU1Q2TAY7 513 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 KRT71Q3SY84 523 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 EXOSC6Q5RKV6 272 aaKnown RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 GTF2IRD2BQ6EKJ0 949 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 CDC73Q6P1J9 531 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 FIGNL1Q6PIW4 674 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 PLXDC2Q6UX71 529 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 PAMR1Q6UXH9 720 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 APOOLQ6UXV4 268 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 BTLAQ7Z6A9 289 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 MTERF4Q7Z6M4 381 aaKnown RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 CROCCP2Q86T23 111 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 GTF2IRD2Q86UP8 949 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 ZNF527Q8NB42 609 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 OR7A2PQ8NGA2 310 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 OR5M1Q8NGP8 315 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 B4GALNT2Q8NHY0 566 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 PSMA8Q8TAA3 256 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 FBXO30Q8TB52 745 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 FNDC9Q8TBE3 224 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 ADAMTS15Q8TE58 950 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 COQ8BQ96D53 544 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 C16orf58Q96GQ5 468 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 ALPK1Q96QP1 1244 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 ACTRT3Q9BYD9 372 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 LIME1Q9H400 295 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 RNF122Q9H9V4 155 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 NEUROD4Q9HD90 331 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 ZNF226Q9NYT6 803 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 ZDHHC2Q9UIJ5 367 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 PROCRQ9UNN8 238 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 VDAC3Q9Y277 283 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
YBX3-218ENST00000546298 EMC9Q9Y3B6 208 aa8.43□□□□□ -1.06
YBX3-218ENST00000546298 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 C7orf72A4D263 438 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 DUXAA6NLW8 204 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 H0YC42 278 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 C16orf97H3BN30 126 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 GTPBP1O00178 669 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 EIF1AYO14602 144 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 BIRC5O15392 142 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 RGS16O15492 202 aaPredicted RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 CFLARO15519 480 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 TYROBPO43914 113 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 GMFGO60234 142 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 SKAP2O75563 359 aaPredicted RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 PLGP00747 810 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms