RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PCYOX1LQ8NBM8 494 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 GALNT11Q8NCW6 608 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 ST6GALNAC3Q8NDV1 305 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 RCN3Q96D15 328 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 LRRC37BQ96QE4 947 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 TRIM8Q9BZR9 551 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 SDHAF3Q9NRP4 125 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 QPCTLQ9NXS2 382 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 B4GALT7Q9UBV7 327 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 KCNE5Q9UJ90 142 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 CBX6O95503 412 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 CELA3AP09093 270 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 NR2F1P10589 423 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 MTPNP58546 118 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 HPCAP84074 193 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 CHRNEQ04844 493 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 SELPLGQ14242 412 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 ZNF141Q15928 474 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 LRRC74BQ6ZQY2 392 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 DUSP19Q8WTR2 217 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 SLC38A5Q8WUX1 472 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 CMTM5Q96DZ9 223 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 SLC39A3Q9BRY0 314 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 DEFB127Q9H1M4 99 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 SLC38A1Q9H2H9 487 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 RUBCNLQ9H714 662 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 A4GALTQ9NPC4 353 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 PPP4R1LQ9P1A2 415 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 SEC14L3Q9UDX4 400 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 FBXL2Q9UKC9 423 aa18.67■□□□□ 0.58
HMGA2-211ENST00000545998 GCN1Q92616 2671 aaKnown RBP18.66■□□□□ 0.58
HMGA2-211ENST00000545998 IGLV3-32A0A0A0MS00 114 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 NDUFB5O43674 189 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 UGT2B17O75795 530 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 CBR3O75828 277 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 GDF1P27539 372 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 PRDX6P30041 224 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 C17orf67Q0P5P2 114 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 CD226Q15762 336 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 ZNF619Q8N2I2 560 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 FADS6Q8N9I5 356 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 CCDC197Q8NCU1 140 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 THUMPD3Q9BV44 507 aaKnown RBP18.66■□□□□ 0.58
HMGA2-211ENST00000545998 PLSCR2Q9NRY7 297 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 GID8Q9NWU2 228 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 DTNAQ9Y4J8 743 aa18.66■□□□□ 0.58
HMGA2-211ENST00000545998 TENM4Q6N022 2769 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 FASNP49327 2511 aaKnown RBP18.65■□□□□ 0.58
HMGA2-211ENST00000545998 CENPVL1A0A0U1RR11 272 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 IGHG3P01860 377 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 BCHEP06276 602 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 SLC10A1Q14973 349 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 MAPK14Q16539 360 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 PDZK1Q5T2W1 519 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 FAM91A1Q658Y4 838 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 NANOGP8Q6NSW7 305 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 MISPQ8IVT2 679 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 GATSQ8NAP1 163 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 OR2M3Q8NG83 312 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 OIT3Q8WWZ8 545 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 MAL2Q969L2 176 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 ZG16BQ96DA0 208 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 TMEM19Q96HH6 336 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 NANOGQ9H9S0 305 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 ACKR4Q9NPB9 350 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 LIPGQ9Y5X9 500 aa18.65■□□□□ 0.58
HMGA2-211ENST00000545998 HEATR5AQ86XA9 2040 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 HPNP05981 417 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 ADRM1Q16186 407 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 GCNT6Q5T4J0 391 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 GFRALQ6UXV0 394 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.58
HMGA2-211ENST00000545998 GHDCQ8N2G8 530 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 OR8J3Q8NGG0 315 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 BCAS4Q8TDM0 211 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 PMM1Q92871 262 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 DSN1Q9H410 356 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 KAT8Q9H7Z6 458 aaKnown RBP18.64■□□□□ 0.58
HMGA2-211ENST00000545998 MTHFD2LQ9H903 347 aaPredicted RBP18.64■□□□□ 0.58
HMGA2-211ENST00000545998 HHATLQ9HCP6 504 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 CALML5Q9NZT1 146 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 MED11Q9P086 117 aa18.64■□□□□ 0.58
HMGA2-211ENST00000545998 DSPPQ9NZW4 1301 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 MED12Q93074 2177 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 HIVEP3Q5T1R4 2406 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 TMEM247A6NEH6 219 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 ANKUB1A6NFN9 424 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 NDUFAB1O14561 156 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 AIM2O14862 343 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 CDC40O60508 579 aaKnown RBP eCLIP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 PDE9AO76083 593 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 ARAFP10398 606 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 RNF144AP50876 292 aaPredicted RBP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 CRISP3P54108 245 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 HSF1Q00613 529 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 MRPL49Q13405 166 aaKnown RBP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 GNA13Q14344 377 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 ATCAYQ86WG3 371 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 CHERPQ8IWX8 916 aaKnown RBP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 ZNF614Q8N883 585 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms